Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00903 ATGGCTATGGCAAGTGTTGTTCCGGCTAACCGTCGGCGAGCGGTGGGCCCGTCGGAAGAGACTATCGAGTTCGAAACCACAGAGGGTATTCAACCAATTCTCAGCTTCGATCATATGGGAATCAAAGAAAATTTACTTCGCGGTATCTATGGATATGGATTTGAAAAACCTTCTGCTATCCAACAACGTGCTGTGAAACCCATTATTGAAGGCCGTGATGTTATAGCTCAAGCCCAATCCGGTACCGGCAAGACCTCTATGATTGCCCTCGTTGTTTGCCAAATGGTCGAACCTACTATCAAGGAAGTTCAAGTGTTAATTTTATCGCCAACTAGAGAATTGGCATCACAGACGGAGCAAGTTATACGGACCATTGGAGAGTATATGAATATACTAGGACACGCTTGCGTTGGTGGCAAAAGTATTGGTGAAGATATTAGGAAGCTCGAGAATGGGGTTCATGTGGTTTCTGGAACGCCTGGTAGAGTTTGTGACATGATTAAGAGGAGAGCATTGCGCACTAGAGCTATCAAGTTGCTAGTCCTTGTGAGTGAATAG 558 0.4534 MAMASVVPANRRRAVGPSEETIEFETTEGIQPILSFDHMGIKENLLRGIYGYGFEKPSAIQQRAVKPIIEGRDVIAQAQSGTGKTSMIALVVCQMVEPTIKEVQVLILSPTRELASQTEQVIRTIGEYMNILGHACVGGKSIGEDIRKLENGVHVVSGTPGRVCDMIKRRALRTRAIKLLVLVSE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00903 185 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 31 182 - -
Pte9g00903 185 Pfam DEAD/DEAH box helicase 59 182 IPR011545 GO:0003676|GO:0005524
Pte9g00903 185 SMART ultradead3 53 184 IPR014001 -
Pte9g00903 185 Gene3D - 9 182 IPR027417 -
Pte9g00903 185 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 65 185 IPR014001 -
Pte9g00903 185 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 34 62 IPR014014 GO:0003724
Pte9g00903 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 182 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00903 Pte-Chr9 30192528 30193325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00903 18 182 Eukaryotic Initiation Factors Gene Family AT3G19760 74.545 2.13e-88 263