Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00858 AATCTGGTGACACTTTTGGGATACTGTCAGGAAAACAATTTGCAGTTTCTCATTTATGAGTATGTACCTAATGGAAGTGTTTCCAGTCACTTATATGGCGCCGGTCAACAGTCACCCGAGAAGCTAGAATTCAAGCACAGACTTTCCATAGCTCAAGGTGCAGCTAAAGGCGATCCTCTGCAAAATCATGGTTTGGCTTATCTTTATTCTCAAAGTCCTCGATTGGTACACAAAGATTTCAAGACTGTGAATGTTCTTGTTGATGAAAATTTTATTGCCAAGGTTGCAGATGCTGGACTTCGTAATTTCCTTGGAAAAGTTGATGTCGCAGGACCATCTTCTCAAGAGACAGCATCGAGTGAGAGGCGACCACCCATGAGGCGACCATCTCCTCCAAATCCCCATGAACAGTTGTATTCTTTTTAG 426 0.4272 NLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSPEKLEFKHRLSIAQGAAKGDPLQNHGLAYLYSQSPRLVHKDFKTVNVLVDENFIAKVADAGLRNFLGKVDVAGPSSQETASSERRPPMRRPSPPNPHEQLYSF* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00858 141 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 107 IPR047117 -
Pte9g00858 141 Gene3D Transferase(Phosphotransferase) domain 1 1 135 - -
Pte9g00858 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Pte9g00858 141 MobiDBLite consensus disorder prediction 110 141 - -
Pte9g00858 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00858 141 SUPERFAMILY Protein kinase-like (PK-like) 1 105 IPR011009 -
Pte9g00858 141 Pfam Protein tyrosine and serine/threonine kinase 1 104 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00858 Pte-Chr9 28797869 28798674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00858 1 100 Receptor kinase-like Gene Family AT3G46290 52.475 3.07e-25 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pte9g00858 PK_Tyr_Ser-Thr 2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00858 - - cit:102630301 193.356