Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00849 | ATGGGTGAGAATAGCCGACATGCTAACAAGTGGACGTTGCATGAGTACTGGGCAAGCGAACAAAAACTGATCGAAGGTGCTTTTAAGTTGGGTTTGGCACCTGCTTTCAATCTCCGACAGGCCATGCCCGACCGCTATTCTTCAGGCTGCACCGTTTATATTGGAAATCTAGATGAGAAGGTGACGGAGAGAGTCTTGTATGATATTTTAATTCAGGTAGGACAAGTGGTAGATCTTCACATGCCCAGAGACAAGGAAACTGGAAAACCAAAAGGTTTTGCTTTTGCTGAATATGAAACTGAAGAGATTGCAGATTATGCAGTCAAACTTTTCTCAGGTCTCGTGACAATTTACAACAGGACATTGAGGTTTGCGTTTCCTTCTCGTGTAAATAGTCAGTCTAATCGCTGTGGATCACATTATGGTGGCAACAATTATGATTACAGCTGTTCAGTATATGGGGCAGCCTCGGATAGATTTAGCCAACCTAGGTCCCGACAATTTTGA | 507 | 0.4339 | MGENSRHANKWTLHEYWASEQKLIEGAFKLGLAPAFNLRQAMPDRYSSGCTVYIGNLDEKVTERVLYDILIQVGQVVDLHMPRDKETGKPKGFAFAEYETEEIADYAVKLFSGLVTIYNRTLRFAFPSRVNSQSNRCGSHYGGNNYDYSCSVYGAASDRFSQPRSRQF* | 169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00849 | 168 | SMART | rrm1_1 | 51 | 125 | IPR000504 | GO:0003723 | |
Pte9g00849 | 168 | SUPERFAMILY | RNA-binding domain, RBD | 42 | 149 | IPR035979 | GO:0003676 | |
Pte9g00849 | 168 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 52 | 123 | IPR000504 | GO:0003723 | |
Pte9g00849 | 168 | Gene3D | - | 37 | 162 | IPR012677 | - | |
Pte9g00849 | 168 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 50 | 129 | IPR000504 | GO:0003723 | |
Pte9g00849 | 168 | PANTHER | RNA BINDING MOTIF RBM PROTEIN -RELATED | 47 | 140 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00849 | Pte-Chr9 | 28453091 | 28456525 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00849 | 45 | 115 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 30.986 | 6.18e-07 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00849 | K12831 | - | vvi:100252755 | 155.992 |