Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00840 | ATGGTGGAACAAGTAGGCATTGACCGGTACTATGATGTTTTTACTGCAACTGTTTGTAACTGTGGTCCTGTTATTACTGAGGAGTCAAAGGCTCAATCAGATTCCTTATCTCAAATGGGAAAGGCAGGTGTTGTTCTCATGGTCTACAGAACATGTGGGAAGAAGGGCAACCATTTGACTTCAAGGTGTCCCTACAAGGATCTTGCCCAACCTGTTGAGTCATTCGTTGACAAGCTTGCTACTGCAGAAGCTACTGCTTCAGGTACAACTAAGGGTGCATATGTTCCTTCTGGCATGAGAGGTGGCGGTACTGAGAGGACTGGATTCGAAATGCAACGCAGGAATGATGAAAACTCTGTGCGTGTCACTAATCTCTCGGAGGACACGTGGGAGCCTGATGTCCTGGAACTCTTCCGGCCTTTTGGTGTTGTGAGTAGAGTCTATATTGCTATTGATCAGAAAACTGGCATGAGCAGAGGGTTCGCTCAAAACTATCAAAAAAAGATATAA | 510 | 0.4529 | MVEQVGIDRYYDVFTATVCNCGPVITEESKAQSDSLSQMGKAGVVLMVYRTCGKKGNHLTSRCPYKDLAQPVESFVDKLATAEATASGTTKGAYVPSGMRGGGTERTGFEMQRRNDENSVRVTNLSEDTWEPDVLELFRPFGVVSRVYIAIDQKTGMSRGFAQNYQKKI* | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00840 | 169 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 118 | 162 | IPR000504 | GO:0003723 | |
Pte9g00840 | 169 | SUPERFAMILY | RNA-binding domain, RBD | 96 | 162 | IPR035979 | GO:0003676 | |
Pte9g00840 | 169 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 28 | 68 | IPR024675 | - | |
Pte9g00840 | 169 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 61 | 162 | - | - | |
Pte9g00840 | 169 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 120 | 162 | IPR000504 | GO:0003723 | |
Pte9g00840 | 169 | Gene3D | - | 65 | 163 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00840 | Pte-Chr9 | 27983826 | 27984335 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00840 | 13 | 161 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 60.390 | 6.27e-59 | 184 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00840 | K03248 | - | sind:105168941 | 208.379 |