Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00840 ATGGTGGAACAAGTAGGCATTGACCGGTACTATGATGTTTTTACTGCAACTGTTTGTAACTGTGGTCCTGTTATTACTGAGGAGTCAAAGGCTCAATCAGATTCCTTATCTCAAATGGGAAAGGCAGGTGTTGTTCTCATGGTCTACAGAACATGTGGGAAGAAGGGCAACCATTTGACTTCAAGGTGTCCCTACAAGGATCTTGCCCAACCTGTTGAGTCATTCGTTGACAAGCTTGCTACTGCAGAAGCTACTGCTTCAGGTACAACTAAGGGTGCATATGTTCCTTCTGGCATGAGAGGTGGCGGTACTGAGAGGACTGGATTCGAAATGCAACGCAGGAATGATGAAAACTCTGTGCGTGTCACTAATCTCTCGGAGGACACGTGGGAGCCTGATGTCCTGGAACTCTTCCGGCCTTTTGGTGTTGTGAGTAGAGTCTATATTGCTATTGATCAGAAAACTGGCATGAGCAGAGGGTTCGCTCAAAACTATCAAAAAAAGATATAA 510 0.4529 MVEQVGIDRYYDVFTATVCNCGPVITEESKAQSDSLSQMGKAGVVLMVYRTCGKKGNHLTSRCPYKDLAQPVESFVDKLATAEATASGTTKGAYVPSGMRGGGTERTGFEMQRRNDENSVRVTNLSEDTWEPDVLELFRPFGVVSRVYIAIDQKTGMSRGFAQNYQKKI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00840 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 118 162 IPR000504 GO:0003723
Pte9g00840 169 SUPERFAMILY RNA-binding domain, RBD 96 162 IPR035979 GO:0003676
Pte9g00840 169 Pfam Eukaryotic translation initiation factor 3 subunit G 28 68 IPR024675 -
Pte9g00840 169 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 61 162 - -
Pte9g00840 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 120 162 IPR000504 GO:0003723
Pte9g00840 169 Gene3D - 65 163 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00840 Pte-Chr9 27983826 27984335 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00840 13 161 Eukaryotic Initiation Factors Gene Family AT3G11400 60.390 6.27e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00840 K03248 - sind:105168941 208.379