Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00827 ATGTCGGTCTTGATTGACCAGGAAATTCATGCTCATAATTATCACCTCGAACCTCGTCTTCTTGCACCCTACATTTCTGGGTTGTCCTCAAAATTCAATCTTGATTCTCATACCATTAAGGTCATGGACCCATTAGAACCAAAACCAAAGGATTTATTAGCTTCCAGGTTTCGAAGTTCAGAAAAATCCGGTTCAAATCTCAATTTCAATTCTCCTCCCGTGGTTTCCAAACCGGTTTCAAGTCTCACAAGGCCTAGGTTGGTAAAGATGAGGAAGCAAACCAATACTCATAATTTGAGACCCTCTGTTGGACCTCCAGACCATGAATTTGCAATTGGTTTCGATACTTTCCAACCTGTTTCAGAGAATTCGGTTTCAATTTCTTCTGGTGGGTTAGGAGTTACTGCAAGTGGTGACAGTGGGAATGGGACATTTGTATTTGGAGCTAAGAATGATTCAGTTTTTGATAAAGAGGTTGTTAAGGATATGAAGAATTTGAAAATCGGTAATGTAAGTGAAGATGGTTTGAATTCTAAAGTATGGTCTACTGGGTCGGAGCAACCTCCATTCGTGTTCAGGAGGGGTGGTAAAACAAGTTCGAATAGTAACGAAACCTTGCTGTCTAAGCTTGGTGAAGATATGTTGAAGTTGAATATTGAAGGTCAATGTACAGGCCTAGCAAAGGAAGGAAGTTCTAGTATAAAATGTACAGATTATGAATCGAAGTTTATTTCTACGAGTACTGATACTATAGGTGGTTCTGTAGGAAAAAATGTTGAAGTGCAGCTGCAAGAAGAGTTGAGGAAGAAATTGAACATAGAAAGAACTGGTAGTACTATCAAGGAGAAGTATGATGATGCCAGTAAGTTTACCTTTCAAAGTAGCAATGCTGGTGTTGATATGTTTACTAGCAGTGCATCTGGTGACCTTCTGAACCAAATGAATGATCTGAATGTTAATGATTCATACATTGGCAGTAGAAAAGAATCAACTTTGTTGAGGAAAATGGATAAGTTGAAGGTAGATAGTTGTGAACAAGCTTCTCGGTCATCATCAGAGAAGGAGATGATAAATGCCGATGTAAGTAATCGTCCAGATAGTTTTGGTCAACATAAAGAGGTTTCAGAAATGGCTGGAAGCGCTGATCCATCAACCTCATTCCCTTCCAGTAGCGATGGAAATGTTTTTGGAGTACCATATGCTAATGCTGCCGTGAACAAGGATGGGTTTATTTTTACCGGAAAACAAGATAAAAAAGGGGCAACTCACGTCGAATTTAAAATGCAAACCACAAAAGCTGACATATTTTCTGGCATTGATCAGAAATTTGAATTTTCGGCGAAGAAAGAACCTAGTAGAAACACATTGAACAAAAATAGTGGAAAGTTGAATGATGCTACCCCAGTCCAGCAGTGGCATGGACAATATTTCGTTCCTAAGGAGAGTAATTCTCAAGAGAACACTGAGGCATTTGAATCGTATTCACCTATGGATGTTTCTCCATACCAAGAAACATTGGCTGATGTTGAGTGTTCCAGAGGAAATTATATGACTTCTAATGAATCAGAAAGAACTGAAGTTAACAACACAACTGTTGGTGGGACAACAACTATTTCCACGGATAATACGGATGAGGATCTAATTTTGGCAACACAAAGTTTGGATATTAATTGTGGGGATGCTATATCCAGTGGAAAACATGATAGTGCAGATTTTCTTGCTGGAAAAGTTGATACTGAAGTTAATGCAGATGAGTCTATGGCTGAGACTGAAACAGAAAGCTTCAAGTCTGCAAATGAGGAGATAGACGTAACGAGTGATTGTTCTGTTATGCTGCAAGGAACTGATATCAATCCAAACAAAAACACTGAGAAACATGAGAGTGATTCGAGAATGCATCTTGGTTGTGCTTCCGGTTCAGATGGCAGCAGTGGTTTAAATTTCATGTTTGCTGCCTCTTCTGCAGTTCAAACTCAGCCTTTGACATCAAAAAGGCATGGTAAAAAGAAAAAAGGGGTGAAATCTACTGATACATATCATAATGCTTCGAATGTGAAAGTGCCTTATTCCTCAAGCTCTCTGTCATATTTTCCACTGTCTGGCACTTCAACACTTTTATCGCATGGGCAAGTCACGAAAGATGAGCGTTCTAATTCTGACATGAAGGTGGAATCCTCTGAGCTGAATAATATGCAGGAGACAAAGGAAGAATCTGTCTTGACTACTGCTGAAATAGTTGCAGCTCAGGAAGCCTGTGAGAAATGGCGATTGAGGGGAAACAATGCCTATAAAAATGGTGATCTGTCTACAGCAGAGGAATGTTATACTCTTGGGCTTAATGCTATTTCACAGAGTGATACATCTACAAGTTGTCTCAGAGCGATGATGCTGTGCTATAGCAACCGTGCTGCCACACGAATGTCTCTTGGAAGGATAAGAGATGCATTACAAGATTGTATCATTGCTGCAGAAATCGATCCTAGCTTTCTCAGGGTGCAACTTAGAGCCGCAAACTGTTACGTGTCTCTCGGAGAAGCTGGAGAAGCTGTAAGATGCTTCAGGAGGTGTCTGCAATCTGGGAGTGAAGTTGTGGATAGAAAGATCACTGTTGAGGCTTCCGATGGCTTACAGAAGGCTCAGAAATTTTCTGAATTGCTGTGTCATTCTCGTGAATGTTTGCAAAGGAGAACACTTTGTGATGTGGGCACTGCACTTGAAAAAGTTAATGAGGCGCTAATAATAAGCCCCTACGCTGATATCTTGCTTGAAATGAAAGCAGAGGCCCTGTTTATGCTGCGGCGATACGAAGAGGTGACTCGGTTGTGTGAAGAGTCCCTTGGTTCTGCTGAAAAAAATTTTCATTCAAACAACAGTGACATGCAACCTGTGGAACTTGATAGTTCTGAGATCTTGAAGAAATTTCACTTCAGATTTTGGCGTTGTCACCTTACTCTGAAATCCTACTTCCACCTTGGAAAGCTTGATGAAGGCATTGCTTCATTTGAGGAACAAGGGAAATTTTTTTCTGCTTTGAAAGGGAATGGGAGTAAGATTTTGGAGTCGGCAATTCCCCTAGCTATTACTGTCCGTGAACTTATACGCTTCAAGGCTGCAGGCAATGAAGCATTTCAGGCTGGAAAGCATGCCGAAGCTGTTGAACACTATACTGCAGCTTTGTCATGCAATGTTGAGTCTCGTCCATTTGCTGCTGTCTGTTTTTGTAATCGTGCTGCTGCGCACAAGGCGCTAGGCCAAATTACTGATGCCATTGCAGATTGCAGTCTGGCTATAGCTCTTGATGGAAATTACTTGAAGGCTCTTTCTAGACGGGCAACTCTTTATGAAATGATCAGAGACTATGGACAAGCTGCTAATGATCTTCAGAAACTTGTTTCTCTTCTAGCTAAGCATGTTGAGAATAAGGCCAATGAGTACGGAACATCTGATAGATCGAATAATTCAGCTAGTGATTTGAGGCAAGCTAGAATTCGACTTTCTGAAGTAGAGGAAGAATCCAAAAAGGATATTCCACTTGATCTGTACCTTATACTGGGAATTGAGCCATCTGTGTCAGCATCAGAAATCAAGAAGGCTTATCGGAAAGCTGCACTAAGGCATCATCCTGACAAGGCTGGTCAGTCCTTGATAAGAAATGAAAATGGTGATGATAGATTGTGGAAGGAACTTGGCGAAGAAGTTCACAAAGATGCTGATAGACTTTTTAAAATGATTGGAGAGGCATATGCAGTGCTTTCAGACCCAACTAAGCGTGCTCGATATGATGCTGAAGAAGAGATGAGGAATGCACAGAAGAAACGAAATGGAAGCAGTACAGTGAGAACCAACACAGATACACCTTATTATCCATCTGAAAGGAGTAGCAACAGGCGCCATTGGAGAGGGGTATACCAAACATATGGTAACACATATCCAAGAGGTACAGAAACGGCTAGATCAAGCAAGTTTAGTGACAAGTGA 3978 0.409 MSVLIDQEIHAHNYHLEPRLLAPYISGLSSKFNLDSHTIKVMDPLEPKPKDLLASRFRSSEKSGSNLNFNSPPVVSKPVSSLTRPRLVKMRKQTNTHNLRPSVGPPDHEFAIGFDTFQPVSENSVSISSGGLGVTASGDSGNGTFVFGAKNDSVFDKEVVKDMKNLKIGNVSEDGLNSKVWSTGSEQPPFVFRRGGKTSSNSNETLLSKLGEDMLKLNIEGQCTGLAKEGSSSIKCTDYESKFISTSTDTIGGSVGKNVEVQLQEELRKKLNIERTGSTIKEKYDDASKFTFQSSNAGVDMFTSSASGDLLNQMNDLNVNDSYIGSRKESTLLRKMDKLKVDSCEQASRSSSEKEMINADVSNRPDSFGQHKEVSEMAGSADPSTSFPSSSDGNVFGVPYANAAVNKDGFIFTGKQDKKGATHVEFKMQTTKADIFSGIDQKFEFSAKKEPSRNTLNKNSGKLNDATPVQQWHGQYFVPKESNSQENTEAFESYSPMDVSPYQETLADVECSRGNYMTSNESERTEVNNTTVGGTTTISTDNTDEDLILATQSLDINCGDAISSGKHDSADFLAGKVDTEVNADESMAETETESFKSANEEIDVTSDCSVMLQGTDINPNKNTEKHESDSRMHLGCASGSDGSSGLNFMFAASSAVQTQPLTSKRHGKKKKGVKSTDTYHNASNVKVPYSSSSLSYFPLSGTSTLLSHGQVTKDERSNSDMKVESSELNNMQETKEESVLTTAEIVAAQEACEKWRLRGNNAYKNGDLSTAEECYTLGLNAISQSDTSTSCLRAMMLCYSNRAATRMSLGRIRDALQDCIIAAEIDPSFLRVQLRAANCYVSLGEAGEAVRCFRRCLQSGSEVVDRKITVEASDGLQKAQKFSELLCHSRECLQRRTLCDVGTALEKVNEALIISPYADILLEMKAEALFMLRRYEEVTRLCEESLGSAEKNFHSNNSDMQPVELDSSEILKKFHFRFWRCHLTLKSYFHLGKLDEGIASFEEQGKFFSALKGNGSKILESAIPLAITVRELIRFKAAGNEAFQAGKHAEAVEHYTAALSCNVESRPFAAVCFCNRAAAHKALGQITDAIADCSLAIALDGNYLKALSRRATLYEMIRDYGQAANDLQKLVSLLAKHVENKANEYGTSDRSNNSASDLRQARIRLSEVEEESKKDIPLDLYLILGIEPSVSASEIKKAYRKAALRHHPDKAGQSLIRNENGDDRLWKELGEEVHKDADRLFKMIGEAYAVLSDPTKRARYDAEEEMRNAQKKRNGSSTVRTNTDTPYYPSERSSNRRHWRGVYQTYGNTYPRGTETARSSKFSDK* 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00827 1325 SMART dnaj_3 1178 1256 IPR001623 -
Pte9g00827 1325 MobiDBLite consensus disorder prediction 709 735 - -
Pte9g00827 1325 Gene3D Tetratricopeptide repeat domain 751 1021 IPR011990 GO:0005515
Pte9g00827 1325 MobiDBLite consensus disorder prediction 1299 1317 - -
Pte9g00827 1325 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 58 1311 - -
Pte9g00827 1325 SUPERFAMILY TPR-like 1035 1137 IPR011990 GO:0005515
Pte9g00827 1325 SUPERFAMILY Chaperone J-domain 1140 1260 IPR036869 -
Pte9g00827 1325 Gene3D Tetratricopeptide repeat domain 1032 1155 IPR011990 GO:0005515
Pte9g00827 1325 MobiDBLite consensus disorder prediction 61 84 - -
Pte9g00827 1325 ProSiteProfiles dnaJ domain profile. 1179 1264 IPR001623 -
Pte9g00827 1325 Gene3D DnaJ domain 1165 1285 IPR036869 -
Pte9g00827 1325 MobiDBLite consensus disorder prediction 1261 1325 - -
Pte9g00827 1325 CDD DnaJ 1179 1253 IPR001623 -
Pte9g00827 1325 SUPERFAMILY TPR-like 753 946 IPR011990 GO:0005515
Pte9g00827 1325 ProSitePatterns Nt-dnaJ domain signature. 1241 1260 IPR018253 -
Pte9g00827 1325 SMART tpr_5 752 785 IPR019734 GO:0005515
Pte9g00827 1325 SMART tpr_5 1104 1137 IPR019734 GO:0005515
Pte9g00827 1325 SMART tpr_5 1070 1103 IPR019734 GO:0005515
Pte9g00827 1325 SMART tpr_5 796 829 IPR019734 GO:0005515
Pte9g00827 1325 SMART tpr_5 1032 1065 IPR019734 GO:0005515
Pte9g00827 1325 SMART tpr_5 830 863 IPR019734 GO:0005515
Pte9g00827 1325 Pfam DnaJ domain 1179 1261 IPR001623 -
Pte9g00827 1325 MobiDBLite consensus disorder prediction 345 390 - -
Pte9g00827 1325 PRINTS DnaJ domain signature 1236 1256 IPR001623 -
Pte9g00827 1325 PRINTS DnaJ domain signature 1181 1199 IPR001623 -
Pte9g00827 1325 PRINTS DnaJ domain signature 1199 1214 IPR001623 -
Pte9g00827 1325 MobiDBLite consensus disorder prediction 61 78 - -
Pte9g00827 1325 MobiDBLite consensus disorder prediction 1272 1290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00827 Pte-Chr9 27254580 27266551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00827 1181 1262 C2H2 Transcription Factor Family AT1G74250 35.366 7.18e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00827 K09527 - qsu:112033751 1174.07