Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00817 | ATGCAGAGCCGCGCAGGAGATGGAGAGGCGGTAGACTTCGAGCCGGAGGACGATGATTTGATGGATGAGGACGCCGGAGCTGAAGCCGATGCCTCCGCGTCTCCTCGAGGAAACGGTTCGCATGCTCTACCTAAACTCAAGTCCGCCATTACTGGTGGTCCTTCGTCTTCTCTCTCTGGGCCTAAGAAGACAAAAGGTCGTGGATTCCGTCAGGATACTGATGTCGACGGCAATACTCGCCTTGCTGGTTCTGATTTCGACTCTCTCAAGTCCTCTGATGGAATCGGCCCTCAAAGATCAATTGAAGGATGGATTATCTTAGTAACGGGGGTTCACGAGGAAGCACAGGAGGACGATCTACACCAGGCTTTTGGTGAATTTGGGGAAATAAAAAACTTGCATCTGAATCTGGACCGTCGCACTGGATTTGTCAAGGGTTATGCATTGATTGAATATGGCACCTTTGAAGAAGCACAGCGTGCAATATCCGAAATGAATGAAGCTGAACTGCTTACACAAACTATCTATGTTGATTGGGCTTTCAGTAATGGACCTTCTGTCAATGGATCCATGAAGAGAAAGAATCCAAGATCCCATCGAGAACGTCGCTCAAGGAGCCCTTGGAGAAGACACTGA | 636 | 0.4906 | MQSRAGDGEAVDFEPEDDDLMDEDAGAEADASASPRGNGSHALPKLKSAITGGPSSSLSGPKKTKGRGFRQDTDVDGNTRLAGSDFDSLKSSDGIGPQRSIEGWIILVTGVHEEAQEDDLHQAFGEFGEIKNLHLNLDRRTGFVKGYALIEYGTFEEAQRAISEMNEAELLTQTIYVDWAFSNGPSVNGSMKRKNPRSHRERRSRSPWRRH* | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00817 | 211 | MobiDBLite | consensus disorder prediction | 187 | 211 | - | - | |
Pte9g00817 | 211 | MobiDBLite | consensus disorder prediction | 193 | 211 | - | - | |
Pte9g00817 | 211 | SMART | rrm1_1 | 105 | 178 | IPR000504 | GO:0003723 | |
Pte9g00817 | 211 | MobiDBLite | consensus disorder prediction | 11 | 26 | - | - | |
Pte9g00817 | 211 | PRINTS | RNA binding motif protein 8 family signature | 169 | 181 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Pte9g00817 | 211 | PRINTS | RNA binding motif protein 8 family signature | 58 | 70 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Pte9g00817 | 211 | PRINTS | RNA binding motif protein 8 family signature | 95 | 109 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Pte9g00817 | 211 | PRINTS | RNA binding motif protein 8 family signature | 151 | 167 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Pte9g00817 | 211 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 104 | 182 | IPR000504 | GO:0003723 | |
Pte9g00817 | 211 | Gene3D | - | 53 | 195 | IPR012677 | - | |
Pte9g00817 | 211 | PANTHER | RNA-BINDING PROTEIN 8A | 7 | 206 | IPR008111 | GO:0003723|GO:0005634|GO:0005737|GO:0006396 | |
Pte9g00817 | 211 | FunFam | RNA-binding protein 8A | 47 | 195 | - | - | |
Pte9g00817 | 211 | SUPERFAMILY | RNA-binding domain, RBD | 97 | 207 | IPR035979 | GO:0003676 | |
Pte9g00817 | 211 | CDD | RRM_RBM8 | 98 | 185 | IPR033744 | GO:0003729 | |
Pte9g00817 | 211 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Pte9g00817 | 211 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 106 | 175 | IPR000504 | GO:0003723 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00817 | 106 | 180 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 30.667 | 1.13e-09 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00817 | K12876 | - | qsa:O6P43_020261 | 279.641 |