Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00798 ATGTCAGAAATTCGCGAGCCTCGCAAGAAATCTCGTATCTGGCTCGGTACTTTTGCGACAGCAGAAATGGTTGCAAGAGCGCATGATGTTGCTGCTCTGAGCATTAAAGGTAACTCTGCAGTTCTAAATTTTCCGGACATAGCTGAGTTGTTGCCAAGACCAGTTTCCTTAACCCCACGTGACATCCAAGCTGCTGCTTCAGCTGCAGCTGCAATGGTCACATTTGATCCAGTACAATCATCCTCCTCATCATCGTTGTCGTCTTTGTGGATCTCAGAAGCATCGGAGTCAGAAGGGTTGGATGAAATTGTTGAGTTGCCAAATATAGAAGGCAGTCTTGACTCAGAAGATTCAGGAAATGAGTTCATCATGATGGACGACACAGGAGACTGGTGGGTGTATCCACCCATGGTGCTAGAGGACGACGCTGAATTGTGTTGTGATTTCTTTGAGCCGCTGTCAACAGTTCAACGCTCAAATAATCCAGGCAAACATGAAAGACAAGTTTGA 510 0.4608 MSEIREPRKKSRIWLGTFATAEMVARAHDVAALSIKGNSAVLNFPDIAELLPRPVSLTPRDIQAAASAAAAMVTFDPVQSSSSSSLSSLWISEASESEGLDEIVELPNIEGSLDSEDSGNEFIMMDDTGDWWVYPPMVLEDDAELCCDFFEPLSTVQRSNNPGKHERQV* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00798 169 CDD AP2 2 46 IPR001471 GO:0003700|GO:0006355
Pte9g00798 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 113 - -
Pte9g00798 169 SMART rav1_2 2 51 IPR001471 GO:0003700|GO:0006355
Pte9g00798 169 ProSiteProfiles AP2/ERF domain profile. 1 45 IPR001471 GO:0003700|GO:0006355
Pte9g00798 169 SUPERFAMILY DNA-binding domain 2 46 IPR016177 GO:0003677
Pte9g00798 169 Gene3D AP2/ERF domain 1 46 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00798 Pte-Chr9 25875807 25876316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00798 1 146 AP2-EREBP Transcription Factor Family AT5G25810 57.051 1.74e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00798 AP2 0.0004 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00798 K09286 - qsa:O6P43_027735 189.889