Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00793 ATGGGAGGAAGATTTGTGGGAGTTAGAAAAAGGTCATGGGAAAGGTATCCAACTGAGATAAAGGATCCTATGACGAAAGAAAGGCATTGGCTTGGCAAATTTGACACAACTGAAGAAGCAGCTAAGTCCATGCGTGGCTCTCGTGCACACACCAACTTCATTTACTCTGATACCCCACCAGATTGTTCAGTGACTTCCATTATCTCGCCTGATGAACAAGCAGCTCAATATGAAAACCATGACTTCTCTGTACTCTTCCTTCAGGATGGCTCATTTTAG 279 0.4373 MGGRFVGVRKRSWERYPTEIKDPMTKERHWLGKFDTTEEAAKSMRGSRAHTNFIYSDTPPDCSVTSIISPDEQAAQYENHDFSVLFLQDGSF* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00793 92 ProSiteProfiles AP2/ERF domain profile. 4 43 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 Gene3D AP2/ERF domain 4 55 IPR036955 GO:0003700|GO:0006355
Pte9g00793 92 SMART rav1_2 4 60 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 CDD AP2 4 53 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 4 69 - -
Pte9g00793 92 Pfam AP2 domain 4 42 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 PRINTS Ethylene responsive element binding protein signature 5 16 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 PRINTS Ethylene responsive element binding protein signature 27 43 IPR001471 GO:0003700|GO:0006355
Pte9g00793 92 SUPERFAMILY DNA-binding domain 5 55 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00793 Pte-Chr9 25661961 25662399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00793 1 69 AP2-EREBP Transcription Factor Family AT5G13910 64.474 6.54e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00793 AP2 8e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00793 K09286 - qsa:O6P43_009772 120.553