Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00773 ATGGCCTCAGAAGATGAGCTTTACACTTTAGAGCTTATCAGACAATATCTTCTAGGGGATTTCATTTCGACAGAGCCCTTCATTTCAAATTTACAACCCATTAAACTTGAAGATGAGTCACTGGAATCTGAAAGCAACTCCTCTTCTAACGAACCAACAACAACTTGTGCTGTTTCCAAAGTTGATTCTAGTTTTGAACCAAAGATGGATCAATGGGTCGATCAGTTTCTGATCAAGAGTCCCAGTTATCCAATCATTTCTTGCTCTGAAACATCCTCAGACTCCAAATTGTGTGAGGAAACAGTAGTGGGGAATGGAAACGTGCCAGAAGATAGTAGTTGTGGGGTTGTAAGACATTTTAGAGGTGTTCGAAGAAGACCATGGGGTAAGTTTGCGGCTGAAATTAGAGACCCCTCCAGGAAAGGAAGCAGGGTATGGCTTGGTACATTTGACAATGCAGTGGATGCAGCTAAGGCTTATGATTGTGCTGCTTTTAGATTGAGAGGTAGAAAAGCAATCTTGAATTTTCCTTTGGAAGCTGGACCATCTCTTCTTCCACCACCTGATTCTTCCGGTAGGCGAAGAAGGAGAGAGCAGTGTGGGGATGTGGGAAGTTGGATGGTTTGGAAGAGGCAACATGTGGAGGATCAAATAACTGAGTTTCCTTGA 669 0.4305 MASEDELYTLELIRQYLLGDFISTEPFISNLQPIKLEDESLESESNSSSNEPTTTCAVSKVDSSFEPKMDQWVDQFLIKSPSYPIISCSETSSDSKLCEETVVGNGNVPEDSSCGVVRHFRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDNAVDAAKAYDCAAFRLRGRKAILNFPLEAGPSLLPPPDSSGRRRRREQCGDVGSWMVWKRQHVEDQITEFP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00773 222 SUPERFAMILY DNA-binding domain 119 178 IPR016177 GO:0003677
Pte9g00773 222 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
Pte9g00773 222 Gene3D AP2/ERF domain 118 179 IPR036955 GO:0003700|GO:0006355
Pte9g00773 222 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Pte9g00773 222 PRINTS Ethylene responsive element binding protein signature 159 179 IPR001471 GO:0003700|GO:0006355
Pte9g00773 222 PANTHER DNA-BINDING DOMAIN 58 190 IPR044808 GO:0003700|GO:0009873
Pte9g00773 222 FunFam Ethylene-responsive transcription factor 2 118 179 - -
Pte9g00773 222 CDD AP2 119 177 IPR001471 GO:0003700|GO:0006355
Pte9g00773 222 Pfam AP2 domain 119 169 IPR001471 GO:0003700|GO:0006355
Pte9g00773 222 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00773 Pte-Chr9 24766210 24766878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00773 117 197 AP2-EREBP Transcription Factor Family AT5G07580 72.840 6.91e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte9g00773 AP2 1.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00773 - - csav:115706715 159.458