Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00755 ATGTCGACGGAACCCCTCAGTTCAAATTTACAACCCATTAAACTTGAAGGTGAGTCACTGGAATCTGAAAGCAACTCCTCTTCTAACGAACCAACAACAACTTGTGCTGTTTCCAAAGCTGATTCTAGTTTTGAACCAAAGATGGATCAATGGGTTGATCAGTTTCTGATCAAGAGTCCCAGTTATCCAATCACATCTTGCTCTGAAACATCCTCAGACTCCAAATTGTGTGACGAAACAGTAGTGGGGAATGGAAACGTGTCAGAAGATAGTAGTTGTGGGGTTGTAAGACATTTTAGAGGTGTTCGAAGAAGACCATGGGGTAAGTTTGCAGCTGAAATTAGAGACCCCTCCAGGAAAGGAAGCAGGGTATGGCTTGGTACATTTGACAATGCAGTGGATGCAGCTAAGGCTTATGATTGTGCTGCTTTTAGATTGAGAGGTAGAAAAGCAATCTTGAATTTTCCTTTGGAAGCTGGACCATCTCTTCTTCCACCACCTGATTCTTCCGGTAGGCGAAGGAGAGAGCAGTGTGGGGATGTGGGAAGTTGGATGGTTTGGAAGAGGCAACATGTGGAGGATCAAATAACTGAATTTCCTTGA 603 0.4378 MSTEPLSSNLQPIKLEGESLESESNSSSNEPTTTCAVSKADSSFEPKMDQWVDQFLIKSPSYPITSCSETSSDSKLCDETVVGNGNVSEDSSCGVVRHFRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDNAVDAAKAYDCAAFRLRGRKAILNFPLEAGPSLLPPPDSSGRRRREQCGDVGSWMVWKRQHVEDQITEFP* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00755 200 PANTHER DNA-BINDING DOMAIN 36 168 IPR044808 GO:0003700|GO:0009873
Pte9g00755 200 Gene3D AP2/ERF domain 97 158 IPR036955 GO:0003700|GO:0006355
Pte9g00755 200 Pfam AP2 domain 98 148 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 CDD AP2 98 156 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 PRINTS Ethylene responsive element binding protein signature 138 158 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 SMART rav1_2 98 162 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 SUPERFAMILY DNA-binding domain 98 158 IPR016177 GO:0003677
Pte9g00755 200 FunFam Ethylene-responsive transcription factor 2 97 158 - -
Pte9g00755 200 ProSiteProfiles AP2/ERF domain profile. 98 156 IPR001471 GO:0003700|GO:0006355
Pte9g00755 200 MobiDBLite consensus disorder prediction 1 41 - -
Pte9g00755 200 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00755 Pte-Chr9 24259800 24260883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00755 96 175 AP2-EREBP Transcription Factor Family AT5G07580 72.500 2.41e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00755 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00755 - - zju:125421651 142.895