Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00730 ATGCTAGCTGCTGCTAGACGTCTAACGGGTCCAGAGCTTCTTCAACCCAGAGGAAGACACAGGGTTGTCTCTCATCATGCCGGTGGTTTTCGATATTTCTATTTTTCTCTTGGAGCTAATGTGAGTAATGGACCATTGGGTAGTAATTTTGTGATCAGCGATTGGAATTGCAGAGTTAAAAGTAGTGCTGATTCTCATGGCTTCAGTTTCAATCTGGGCAACCACGGAATAAGCTCAATTTTGCAAATTACTCATGTCAAGGGTTTTCACTCTGATTCAACGGCTCCTTTTAGCTTTTCCGATTGCAGCAGACCAGCCTCGCCTTACATGCCGCAGCAACCTTTTTCGATGGCAAGTGGGAGATTGTTGTTTTCAACATCAACAAATAAAAATGATAGTGACGATGGGAAAGTGTCCAAGCAGAATAAGCAGAAAGATGGTAGCGGCATTACTCATAAAACTTCTGGAGAACATGTTGCTGACATGAAAATATTACAAACTCTTGCTAGTTACTTATGGATGAAAGGCAACCCTGAGTTCAGGATCAGGGTCATTACGTCATTAGGTTTTTTAGTTGGGGCGAAGGTTTTGAATGTGCAGGTACCTTTCCTATTCAAGCTTGCTGTTGATTGGTTGACAACCGCAACAGGAAATGCCAGTGCTCTGGCTGCCTTTGCGACAGCAAATTCAACTTTAGTGGCTCTTTTTGCCACCCCTGCATCAGTTTTGATTGGATATGGCATTGCACGCACAGGAGCTTCTGCCTTTAACGAACTGCGAACTGCTGTATTCTCGAATGTAGCACTACGAACGATCCGCACAGTATCTAGAAAGGTTTTCTCACATTTGCATGACCTTGATCTTCGATATCATCTTAGTCGTGAAACAGGAGCATTAAATAGAATAATTGATCGTGGAAGCCGTGCAATAAACTTTATTCTCTCATCCATGGTGTTCAATATTGTACCCACTATATTAGAGATATCTATGGTATCAGGTATTCTGGCATACAAATTTGGGCCACCATTTGCTTGGATCACGTCCTTATCAGTTGCTGCTTATGTCATTTTTACATTGACTGTGACACAGTGGAGGACCAAGTTTAGAAAGATCATGAATAAAGCTGATAATGATGCAAGTACAAGGGCCATTGATTCACTAATAAATTATGAGACAGTGAAATATTTCAATAACGAAGATTATGAAGTTGACCAATATGACCTGTACTTGAAGAGGTATGAAGATGCTGCACTGAAAACACAACGCAGTCTTGCTTTTCTGAATTTCGGCCAAAATATTATCTTCAGTACAGCCTTATCAACAGCCATGGTGTTATGTTCACACGGTATTTTGAATGGCAATATGACAGTTGGTGACTTGGTCATGGTTAATGGGCTTCTCTTCCAACTGTCTCTGCCTCTCAATTTCCTTGGCAGTGTTTATCGTGAGACCATACAGAGTCTTGTTGATATGAAAGCCATGTTTCAGTTACTGGAGGTAAGAGCAGATATTAGAGATAAGGATAATGCAAAGCCTCTGATGTTGGATGGGGGAAGCATTGAATTTAATGACGTTAATTTCAGTTACTTAGCAGACAGAAAGATTCTTGATGGGGTATCTTTTGTTGTCCCAGCTGGAAAAAGTGTGGCGATTGTTGGAACCAGTGGAAGTGGGAAGTCCACCATACTTAGACTAATCTTCAGGTTTTTTGATACTCATTCAGGAAATATAAAGATAGATGGTCAGGACATTCGAGATGTAACTCAAGAGAGTCTCCGGAAATCCATTGGTGTTGTGCCACAGGATACAGTGCTTTTCAATGATACCATATTCCACAATATTCACTATGGTCGGCTTTCGGCAACCAAAGAGGAGGTTTATGAAGCAGCTCGACAAGCATCTATTCATGATACTATCATGACTTTCCCAGAGAAGTATTTAACTGTTGTTGGTGAACGGGGACTGAAGTTAAGTGGTGGTGAGAAGCAGCGCGTTGCCCTAGCTCGTGCATTCTTGAAAGCGCCACCAATTTTGTTATGTGATGAAGCGACAAGTGCACTTGACAGCACAACGGAGGCAGAAATTTTAAGTGCACTGAGATCTCTGGCAAATAATAGAACATCAATCTTCATTGCCCATAGACTTACGACTGCCATGCAGTGTGACGAGATCCTAGTACTGGAAAATGGGAAGGTAGTTGAGCAAGGACCACATGAGGATCTCTTACTGAAGGCAGGAAGATATGCGCAGCTATGGGGACAGCAGAACAATACAGTTGATGCACTTGACTCTGCCATCAAGTTGGAGAAATAA 2313 0.4189 MLAAARRLTGPELLQPRGRHRVVSHHAGGFRYFYFSLGANVSNGPLGSNFVISDWNCRVKSSADSHGFSFNLGNHGISSILQITHVKGFHSDSTAPFSFSDCSRPASPYMPQQPFSMASGRLLFSTSTNKNDSDDGKVSKQNKQKDGSGITHKTSGEHVADMKILQTLASYLWMKGNPEFRIRVITSLGFLVGAKVLNVQVPFLFKLAVDWLTTATGNASALAAFATANSTLVALFATPASVLIGYGIARTGASAFNELRTAVFSNVALRTIRTVSRKVFSHLHDLDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNIVPTILEISMVSGILAYKFGPPFAWITSLSVAAYVIFTLTVTQWRTKFRKIMNKADNDASTRAIDSLINYETVKYFNNEDYEVDQYDLYLKRYEDAALKTQRSLAFLNFGQNIIFSTALSTAMVLCSHGILNGNMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKAMFQLLEVRADIRDKDNAKPLMLDGGSIEFNDVNFSYLADRKILDGVSFVVPAGKSVAIVGTSGSGKSTILRLIFRFFDTHSGNIKIDGQDIRDVTQESLRKSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYEAARQASIHDTIMTFPEKYLTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILSALRSLANNRTSIFIAHRLTTAMQCDEILVLENGKVVEQGPHEDLLLKAGRYAQLWGQQNNTVDALDSAIKLEK* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00730 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 755 IPR027417 -
Pte9g00730 770 FunFam ABC transporter B family member 25 512 766 - -
Pte9g00730 770 Pfam ABC transporter transmembrane region 185 473 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte9g00730 770 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 520 754 IPR003439 GO:0005524
Pte9g00730 770 SUPERFAMILY ABC transporter transmembrane region 178 491 IPR036640 GO:0005524|GO:0016020
Pte9g00730 770 CDD ABCC_ATM1_transporter 520 755 - -
Pte9g00730 770 Gene3D - 512 766 IPR027417 -
Pte9g00730 770 FunFam ATP-binding cassette sub-family B member 7 156 508 - -
Pte9g00730 770 MobiDBLite consensus disorder prediction 133 154 - -
Pte9g00730 770 Gene3D ABC transporter type 1, transmembrane domain 171 510 IPR036640 GO:0005524|GO:0016020
Pte9g00730 770 CDD ABC_6TM_ATM1_ABCB7 187 494 - -
Pte9g00730 770 ProSitePatterns ABC transporters family signature. 657 671 IPR017871 GO:0005524|GO:0016887
Pte9g00730 770 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 171 751 IPR039421 -
Pte9g00730 770 MobiDBLite consensus disorder prediction 128 154 - -
Pte9g00730 770 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 185 486 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte9g00730 770 SMART AAA_5 545 731 IPR003593 GO:0016887
Pte9g00730 770 Pfam ABC transporter 536 685 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00730 Pte-Chr9 23027741 23043366 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00730 356 756 Calmodulin-binding Proteins AT2G36910 36.408 7.28e-62 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00730 K05662 - cave:132163259 1078.54