Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00726 ATGGCAGTGAAACCCTCGAGAGCTGATAAGAAAATTGCTTACGACAAGAAGCTTTGCCGTCTTCTAGATGAGTACAGCCAGATCCTTATTGTTGGTGCTGACAACGTTGGTTCAAAGCAGCTCCAAGATATTCGCAAGGGTTTAAGAGGTGACTCTGTCATTTTGATGGGTAAGAACACCATGATGAAGCGATCTATAAAGATTCATGCCGAGAACACTGGCAATAAGGCTTTACTCTCTCTTATTCCTCTCTTGGCGGGGAACGTTGGCTTCATTTTCACGAAGGGTGACTTGAAAGAAGTGAGCGAAGAGGTAGCAAAGTACAAGGTTGGAGCCCCAGCTCGTGTTGGCCTTGTTGCACCAATTGATGTGATTGTTCCCCCTGGAAACACTGGACTGGATCCTTCGCAGACCTCCTTCTTCCAGGTCCTCAACATTCCAACCAAGATTAATAAAGGTACTGTGGAGATTATTGCTTCTGTGGAAATCATTAAGAAGGGTGAGAAGGTGGGCTCATCTGAGGCTGCTCTGCTGTCAAAGCTTGGGGTAAGGCCCTTCTCCTATGGACTACTAGTCCAATCGGTTTATGAGAATGGATCAGTCTTCAGCCCTGAGGTTCTTGACCTCACTGAGGATGATCTTGCTGCAAAGTTTGCTGAAGGAGTCTCCATGGTCGCATCCTTATCACTGTCACTTTCCTATCCAACGCTTGCTGGTGCACCTCACATGCTCATCAATGGGTACAAGAATGTCTTGTCTGTTACAGTGGCTACTGAATACTCCTTCCCGCAAGCAGAAAAAGTCATAGAGTACCTCAAGGATCCAAGCAAGTTTGCTGCCGCGGCAGCTCCTGCAGCACCAGCTGCTTCTGTTTCTGGAACTGCGAAGGTGGAAGACAAGAAGGAAGAGCCAGAAGAAGAATCTGATGATGAGCCAATGATGAACCTATTTGATGACTGA 960 0.4698 MAVKPSRADKKIAYDKKLCRLLDEYSQILIVGADNVGSKQLQDIRKGLRGDSVILMGKNTMMKRSIKIHAENTGNKALLSLIPLLAGNVGFIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIASVEIIKKGEKVGSSEAALLSKLGVRPFSYGLLVQSVYENGSVFSPEVLDLTEDDLAAKFAEGVSMVASLSLSLSYPTLAGAPHMLINGYKNVLSVTVATEYSFPQAEKVIEYLKDPSKFAAAAAPAAPAASVSGTAKVEDKKEEPEEESDDEPMMNLFDD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00726 319 FunFam 60S acidic ribosomal protein P0 113 186 - -
Pte9g00726 319 Gene3D - 6 209 IPR043141 -
Pte9g00726 319 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 303 - -
Pte9g00726 319 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Pte9g00726 319 Gene3D - 114 185 IPR043164 -
Pte9g00726 319 Pfam Ribosomal protein L10 9 108 IPR001790 -
Pte9g00726 319 PIRSF L10E 1 318 IPR030670 GO:0042254
Pte9g00726 319 MobiDBLite consensus disorder prediction 303 319 - -
Pte9g00726 319 Pfam 60s Acidic ribosomal protein 234 317 - -
Pte9g00726 319 SUPERFAMILY Ribosomal protein L10-like 9 134 IPR043141 -
Pte9g00726 319 MobiDBLite consensus disorder prediction 283 319 - -
Pte9g00726 319 CDD Ribosomal_P0_L10e 10 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00726 Pte-Chr9 22869839 22871607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00726 1 293 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 78.498 5.20e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00726 K02941 - qsa:O6P43_014014 485.723