Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00691 ATGGAACAAAGAAGGCATGCGCCTAGGCGTGGGCTAGGCGCAAATTTTAATGCTGACTCTGATCAGTACAAATGGCTTCAAGCTGATTTGGCTAAGACTCGAGTCTATGACAACAAGGCCAATTCATGTGGTCTGTTGTACATTACAATTGGTGACAGAGGCCATGTGTTTGAGAAGATTCAAGTTCATGCATGGGTGTTGTTGAAGTCACCTATTGAAGACATAGTCATATGGTGCAACAATGTCAGGATACAGAAAACGTTTTGCATACCACCTTCAAAAAATAAAAAGTTACGAGCTGAGGCAGAGAGAGAGAGAGGAGATATGGATGAGGAGTACCATTACGACGAGGAGCAAGAGATATACGAGGATGAAATTAACGGAGACGGAGACATGGAACCCGATTCCGGTTCTCCTAAGATGGGACTGAATCAAGAGGACCACGAACACGAGCATGACCCTAATAAGGATTTGGTGGAAATGAAGAAAAGACTCAAGCAGATTGAAGAAGAAGCTGGGGCCCTTCGTGAAATGCAGGCCAAGGTGGAAAAAGAGATGGGTGTTGTTCAAGAGTCCTCTGGTTTCTCTTCAACACAGGCTGAAAAGGAGGAAGTGGACGCTCGGTCCATTTATGTTGGTAATGTTGATTATGCATGTACACCTGAAGAGGTGCAGCAGCACTTCCAATCTTGTGGAACTGTGAATAGAGTGACCATATTGACAGACAAATTTGGTCAACCAAAAGGATTTGCTTATGTTGAGTTTGTGGAAGTTGAAGCTGTGCAGAATGCTCTCTTACTAAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTATCTGCGAAGAGGACAAATGTTCCAGGCATGAAACAGTACCGTGGGAGACGCCCCAACCCATATTTTGGTCGTGGAAGACCCTTCATGCCTGCCCCTCCATTTGGTTATGGGAGGGTTCCAAGATTCAGGCGACCCATGCGATACTAG 984 0.4502 MEQRRHAPRRGLGANFNADSDQYKWLQADLAKTRVYDNKANSCGLLYITIGDRGHVFEKIQVHAWVLLKSPIEDIVIWCNNVRIQKTFCIPPSKNKKLRAEAERERGDMDEEYHYDEEQEIYEDEINGDGDMEPDSGSPKMGLNQEDHEHEHDPNKDLVEMKKRLKQIEEEAGALREMQAKVEKEMGVVQESSGFSSTQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPNPYFGRGRPFMPAPPFGYGRVPRFRRPMRY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00691 327 Gene3D - 142 281 IPR012677 -
Pte9g00691 327 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 112 299 - -
Pte9g00691 327 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 210 278 IPR000504 GO:0003723
Pte9g00691 327 Coils Coil 158 185 - -
Pte9g00691 327 MobiDBLite consensus disorder prediction 125 155 - -
Pte9g00691 327 SMART rrm1_1 209 280 IPR000504 GO:0003723
Pte9g00691 327 SUPERFAMILY RNA-binding domain, RBD 197 308 IPR035979 GO:0003676
Pte9g00691 327 CDD RRM_II_PABPs 209 280 - -
Pte9g00691 327 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 208 284 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00691 Pte-Chr9 14879936 14887720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00691 209 280 Eukaryotic Initiation Factors Gene Family AT2G36660 36.986 5.75e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00691 K14396 - cpap:110820552 323.939