Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00688 ATGGCGGATGCTCCAGCGAGTCCAGCAGGTGGGAGCCACGACAGTGGCGGCGAACAAAGTCCACACTCGGGTCATGGTGCACGTGAACAGGACAGGTTCCTTCCTATTGCTAATATCAGTCGGATCATGAAGAAAGCGTTGCCTGCGAATGGTAAGATTGCAAAGGATGCTAAAGACACCATGCAAGAATGTGTTTCTGAATTCATCAGCTTCGTTACCAGCGAAGCTAGTGACAAGTGCCAGAAGGAAAAGAGGAAGACTATTAACGGGGATGATTTATTATGGGCTATGGCAACGCTAGGGTTTGAGGATTACATAGAACCACTTAAGGTGTACCTAGCTAGGTACCGAGAGTTGGAGGGTGATACAAAAGGATCTGTTAGAAGTGGAGATGGTTCTGCTCAAAGAGGTGGAGTCAATGTTGGAGTTCAAAATTCACAGTTTGCTCATCAAGGTTCAATAAACTATATCAATTCACAAGTAATCTCTCTCTTTCTCTCTCCCTTCATTGGTTGTGTATAA 522 0.4521 MADAPASPAGGSHDSGGEQSPHSGHGAREQDRFLPIANISRIMKKALPANGKIAKDAKDTMQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRELEGDTKGSVRSGDGSAQRGGVNVGVQNSQFAHQGSINYINSQVISLFLSPFIGCV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00688 173 PRINTS CCAAT-binding transcription factor subunit A signature 80 98 - -
Pte9g00688 173 PRINTS CCAAT-binding transcription factor subunit A signature 61 79 - -
Pte9g00688 173 PRINTS CCAAT-binding transcription factor subunit A signature 99 117 - -
Pte9g00688 173 SUPERFAMILY Histone-fold 30 133 IPR009072 GO:0046982
Pte9g00688 173 FunFam Nuclear transcription factor Y subunit B-3 22 147 - -
Pte9g00688 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 33 97 IPR003958 -
Pte9g00688 173 Gene3D Histone, subunit A 22 153 IPR009072 GO:0046982
Pte9g00688 173 ProSitePatterns NF-YB/HAP3 subunit signature. 64 80 IPR003956 GO:0005634|GO:0006355|GO:0043565
Pte9g00688 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 142 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pte9g00688 173 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00688 Pte-Chr9 14447772 14452962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00688 1 171 CCAAT-HAP3 Transcription Factor Family AT2G37060 71.264 1.33e-80 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pte9g00688 CBFD_NFYB_HMF 1.6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00688 K08065 - jre:109002991 273.863