Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00685 ATGACTGTGAGTAACAACATTAGCAAAAACATGGGGCAGTTTGGAGATACAACCCTGACCAAGGTTTTTGTTGGAGGGCTGGCATGGGAAACCCCAAAGGAACTGTTGAGAGAACACTTTCAAAACTATGGTGAGATCCTTGAGGCTGTGATCATCTCAGACAAAGTCACTGGCAGATCCAAAGGATATGGCTTTGTTACTTTCAAGGAAGCTGAGGCTGCAAAGAAGGCATGTGAGGAAGCTAACCCAATCATCAATGGCCGGCGAGCGAACTGCAATCTTGCTTCGCTTGGCGCCTGCCGCCAGAGAGGTTCATCCAACCCACCACCACCTCTTCCTGCTGCTCCTCTTCCCCAACAAGGAGCAAATAGTGGGGCAAGGCCTCTTAATGCAACCACTGCAAATCAAGTCCAATGGTACTATCCTGTCGGACTACCAGCAGCTCCATATCATCATCAACAACATCATCTCATTCCTTACTATGGGTACACTCCAACCTATTTTGCCAGTGGCCTCCATTACAACCATCTCACACAGAATTCAAAGCTGAACTATTCAAATGGAGGGGCCTACATGAACAGCCACTTTTCTTCTATGAATCCTGCTGGACAACCTGTAGTTGGTGCCAACACAGTCATACCTGTCTACCCTGCTGTCACTCACATTCCTCATATGCAAACCATGGGCGTACCTGCAGCCCACATATACCAACAAGCAACGCCGGCATCTAACACGCTGCCAGTTAGGGTGTCCAAGCAACCATCCATTCTCTCTAACCCTAACACAGGTACCTACCCACTAGCACATATATAA 813 0.4809 MTVSNNISKNMGQFGDTTLTKVFVGGLAWETPKELLREHFQNYGEILEAVIISDKVTGRSKGYGFVTFKEAEAAKKACEEANPIINGRRANCNLASLGACRQRGSSNPPPPLPAAPLPQQGANSGARPLNATTANQVQWYYPVGLPAAPYHHQQHHLIPYYGYTPTYFASGLHYNHLTQNSKLNYSNGGAYMNSHFSSMNPAGQPVVGANTVIPVYPAVTHIPHMQTMGVPAAHIYQQATPASNTLPVRVSKQPSILSNPNTGTYPLAHI* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00685 270 SMART rrm1_1 21 93 IPR000504 GO:0003723
Pte9g00685 270 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 97 IPR000504 GO:0003723
Pte9g00685 270 Gene3D - 14 99 IPR012677 -
Pte9g00685 270 PANTHER BOULE-RELATED 8 251 - -
Pte9g00685 270 MobiDBLite consensus disorder prediction 102 128 - -
Pte9g00685 270 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 82 IPR000504 GO:0003723
Pte9g00685 270 SUPERFAMILY RNA-binding domain, RBD 16 102 IPR035979 GO:0003676
Pte9g00685 270 FunFam Putative RNA-binding protein ARP1 14 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00685 Pte-Chr9 13996451 13998458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00685 16 201 C2H2 Transcription Factor Family AT2G19380 31.220 2.04e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00685 - - mnt:21397268 317.39