Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00682 ATGATATTGATAGTAATAAATATTCGTGTCGATTATGTAGCTGTTGAGGCAAAAGGATTCATTGCTAAGGATATGGAATTTCAAAACACTGCTGGACTTGATCAAAGTCAAGTAGTGGCACTCAGAGTCAAAGGAGATATGTCAGTTTTCTTCAACTGCAAAGTGGATGGTTATCAAGACACCTTATGGGTTCAGGCCGATCGTCAATTCTACCGTGACTGTGTCATCTCCGGCACTATCGATTTCATTTTTGGAGACTCTGTTGCTTTCATCCAGAACTCTCATATCATTGTTAAAAGACCAGAAGCTAGACAATACAACGTTGTCACAGCTCAAGGAGGGTTTTTTGATCTAGAAGGATGGACTCCTAGGAATGCAACGACCCCTCCTTTTAATTTCTTATTCTATGCTGAGTATGTGAATACGGGACCTGGTGCTGCTGTCCATGGCAGGGTGAACTGGAAAGTGCTGCTTCAAGCGGCCAGTCTTCTCTTGCTTCGTCGACGGTGCTGCTTCGTCGGTGCTGCTTCAAGTGGCCAGTCTTCTCTTGCTTCGTCGCCGGTGCTGCTTCAATCTTGGCTTGTTCTGTTCGTGCTGCGTTCTGTAACTTCTGTTCGTGCTGCATCTGAATCGTTGAGGACTTGA 645 0.4496 MILIVINIRVDYVAVEAKGFIAKDMEFQNTAGLDQSQVVALRVKGDMSVFFNCKVDGYQDTLWVQADRQFYRDCVISGTIDFIFGDSVAFIQNSHIIVKRPEARQYNVVTAQGGFFDLEGWTPRNATTPPFNFLFYAEYVNTGPGAAVHGRVNWKVLLQAASLLLLRRRCCFVGAASSGQSSLASSPVLLQSWLVLFVLRSVTSVRAASESLRT* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00682 214 ProSitePatterns Pectinesterase signature 2. 76 85 IPR033131 -
Pte9g00682 214 Gene3D - 8 117 IPR012334 -
Pte9g00682 214 SUPERFAMILY Pectin lyase-like 11 155 IPR011050 -
Pte9g00682 214 PANTHER PECTINESTERASE 114 156 - -
Pte9g00682 214 Pfam Pectinesterase 13 113 IPR000070 GO:0030599|GO:0042545
Pte9g00682 214 Pfam Pectinesterase 116 157 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00682 Pte-Chr9 13080555 13081888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00682 14 157 Carbohydrate Esterase AT3G10710 39.062 3.89e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00682 K01051 - vvi:100241799 157.147