Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pte9g00673 | ATGTCGACAGTAGGCAGTGGAAGGATGGATGGTATTGAGAAAGTAGAGGTGGTGAGAAATATTAACAATAATGGAGTTGACAGTGGAAAGAAGGAAAAGGAGAAACAGAATAAGCAGCAAATCCCATGGCTTACCAGTCACATTCGGGTTAGGGTCATTAGCAAAGATTTCAAGAGAGGTAGATTTTATCTGAAGAAGGGAAAGGTTCTAGACGTGATTGACCCTACTACTTGTGACATAGCAATGGATGATGGCGAGGAGATCATTCAAGGGGTTTCCCAAGAATATCTGGAGACAGCTATCCCCAGGCGTGGGGGAAATGTTCTTGTTTTGTATGGTAAGCATAAGGGAGCCTATGGAAGTCTTGTTGAGAAGAATTTGGACAGAGAAGTTGGTGTTGTTCAGGATGCTGATTCCCATGAATTGCTTAGTGTTCGCCTTGAACAAATGGCCGAGTATATTGGGGACCCAAGTTACTTGGGATATTAA | 489 | 0.4294 | MSTVGSGRMDGIEKVEVVRNINNNGVDSGKKEKEKQNKQQIPWLTSHIRVRVISKDFKRGRFYLKKGKVLDVIDPTTCDIAMDDGEEIIQGVSQEYLETAIPRRGGNVLVLYGKHKGAYGSLVEKNLDREVGVVQDADSHELLSVRLEQMAEYIGDPSYLGY* | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pte9g00673 | 162 | Gene3D | - | 47 | 101 | - | - | |
| Pte9g00673 | 162 | PANTHER | G PATCH AND KOW-CONTAINING | 30 | 159 | IPR045166 | GO:0000398 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pte9g00673 | Pte-Chr9 | 12151804 | 12152292 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pte9g00673 | 27 | 135 | C2H2 Transcription Factor Family | AT1G55460 | 29.600 | 8.12e-08 | 48.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pte9g00673 | K13101 | - | qsa:O6P43_026128 | 207.608 |