Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00663 ATGGGGCGTGTTCGCACTAAGACTGTTAAAAAGTCATCAAGGCAAGTGATAGAGAGGTATTATTCTAAGATGACATTGGATTTCCACACGAACAAGAAGATCTTAGAGGAAGTTGCCATCATTCCTTCAAAGAGGCTTAGGAACAAGATTGCTGGGTTCTCTACACATCTCATGAAGCGTATCCAGAAGGGTCCAGTTCGTGGTATCTCATTGAAACTCCAAGAAGAAGAACGTGAGCGTCGCATGGACTTTGTTCCCGATGAGTCAGCTATTAAGATTGATGAGATTAAGGTTGACAAAGAGACCAAGGACATGCTTGCAGCTCTTGGAATGTCTGAAATTCCTGGACTTGTTGATGCTGAGCCACAGCCTGCAATTGCTGTTCAGGCTTTTGGCAGGGGTCCTATTGGAGGTGGTGGTCGGAGGTCTCAGTTCTAA 438 0.4521 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETKDMLAALGMSEIPGLVDAEPQPAIAVQAFGRGPIGGGGRRSQF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00663 145 PANTHER 40S RIBOSOMAL PROTEIN S17 1 125 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pte9g00663 145 Pfam Ribosomal S17 1 118 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pte9g00663 145 FunFam 40S ribosomal protein S17 1 62 - -
Pte9g00663 145 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Pte9g00663 145 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pte9g00663 145 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Pte9g00663 145 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00663 Pte-Chr9 11625341 11627346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00663 1 134 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 86.667 6.18e-81 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00663 K02962 - qsa:O6P43_004874 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00663 9 11625341 11627346 Pte9g00663 9 11625341 11627346 RCT