Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00657 ATGGATACATCAAACCCTTCAGCGTTTGTAAATGCGGGGTTGTTGAACGGTTATATTGGGAGGAAAGTTCGTACTGTGGTCCAAGTCATCAACTTTGATAGTGGAGTTGTGCAAGGAAAATCCACAGATGATGGGCTTCTGTACATTAAAGGATTGCCTTCATCAGAGGTTCCTCCAATGAATTATGTTGAGGTGATTGGTATCGCAGACAGTTATCAGTCAATCAATGCTGATATATGGACTGACTTCGGCAAGCAATTCGATACCCAGTCTTACAACCAATTGTGTCAACTAGCAAATGGTGATTTTAGGCATCTGTTTCTGTAG 327 0.4159 MDTSNPSAFVNAGLLNGYIGRKVRTVVQVINFDSGVVQGKSTDDGLLYIKGLPSSEVPPMNYVEVIGIADSYQSINADIWTDFGKQFDTQSYNQLCQLANGDFRHLFL* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00657 108 Gene3D - 1 108 IPR012340 -
Pte9g00657 108 CDD RPA3 6 107 - -
Pte9g00657 108 SUPERFAMILY Nucleic acid-binding proteins 5 100 IPR012340 -
Pte9g00657 108 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 108 - -
Pte9g00657 108 Pfam Replication factor A protein 3 1 101 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00657 Pte-Chr9 11398857 11400043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00657 1 109 Core DNA Replication Machinery Family AT4G18590 59.091 8.14e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00657 K10740 - qsa:O6P43_004885 152.91