Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00634 ATGGCTTCCGAGGATTTTCCTCTAATCGAGTCGCCTTCTCACCATCCTCACTCACAGTCTCACCACGCGCATACGCGCCACTTCCCTTCGTCGTCTTCCTCTAGCCCTTCCAAAGTTCCAGATCCAACCGTAGACTCTGCCAACGGCGATTATTACTCCCAAACCTTTCACGATACTGACCCAGACGGCCAGTCCAATTCGAATAAACCCGGATCGTTGGCTTCAATACCTAACGGGAAACGACCCACCAGTAACCCTTACTACTACAGCAACACCAAAAAGGTAAAACCCTCCGGATCCGGGAATGTGGGGGGAAGTGGTGATCCGGACTCAGGGACCGATACTGGGTATCGAGGAGATTATCGGAAGGACAGGGAGGAATGGTGTGATACAGCAATTTGTAGTTTGCTTGATGCGTACACAGAGAAATTCAACCAGCTGAACCGTGGGAATCTACGTGGCCGTGACTGGGAGGAGGTGGCGGATGCGGTGAGTGAACGGTGTGGTGGCAACGTAGACGGTGTTGTTGAAGGTAAGCATAAGGCTTATAAGAGTGTAGAGCAGTGTAAAAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTGCAGAGAATGACTATTGGTGGGTTGACTACAAGTCATTGGCATTGGTTTAAGAAAATTGAAGCCATTGTTGGGAATTCGGTGGCCTTGAAAGGTGGGCCTGATGAAGACAAGGATGGTGCTACTGGAGCTAACTCATCTGCTATTGTCAAACCTTCAAAAAGCAGATATACTCCAAACAATGTTTCAATGATGAATAATATAAAACCAAAACCTGCAACTAATCTAAAATGGCGCAGAGTGGTGTTTAAAATCAGTGGTTCGGCATTAGCTGGGAGTAATCAAAGTATTGATCCTAAGGTTGCATTGCTGGTTGCGAGGGAGGTATCAACTGCTTGTCGTCTTGGCGTTGAGGTGGCTATTGTTGTTGGTGGTCGTAATTTCTTCTGTGGAGATGCATGGGTAAATGCCACTGGATTAGATAGACCTATAGCCTACCAAATTGGTATGATGGCAACTGTAATGAACTCCATACTACTTCAATCTGCCTTGGAGAAATTGGGCATACAGGCACGTGTTCAGAGTGCGTTTGCAATGCCAGAGGTTGTTGAACCATACAGTCGACAAAAAGCCATTAGACATCTTGAGAAAGGAAGAGTTGTCATTTTTGGTGGTGTGGGTGCTGGCACTGGGAACCCACTTTTCACAACAGATACAGCAGCAGCGCTGAGAGCTTCTGAGCTTGATGCTGATGCACTCCTCAAGGGGACTAGTGATAGTGGCGTCTATGATTGCCATGCCAGTAGTGAAAATGTCATTGTCGATCACATTTCATTCAGGGACGTGGTATCTAGAGGCATTACGTCAATGGACATGATGGCGCTGGCATATTGTGAAGAGAATGGGATTCCTGTTGTGATCTTCAATTTGCTTGGACCTGGGAGTATCTCAAGGGCATTGTGTGGAGATCAAGTCGGTACCTTGATTGATCAAGCAGGAAGGATTAGTTGA 1560 0.4654 MASEDFPLIESPSHHPHSQSHHAHTRHFPSSSSSSPSKVPDPTVDSANGDYYSQTFHDTDPDGQSNSNKPGSLASIPNGKRPTSNPYYYSNTKKVKPSGSGNVGGSGDPDSGTDTGYRGDYRKDREEWCDTAICSLLDAYTEKFNQLNRGNLRGRDWEEVADAVSERCGGNVDGVVEGKHKAYKSVEQCKNKIDNLKKRYKVELQRMTIGGLTTSHWHWFKKIEAIVGNSVALKGGPDEDKDGATGANSSAIVKPSKSRYTPNNVSMMNNIKPKPATNLKWRRVVFKISGSALAGSNQSIDPKVALLVAREVSTACRLGVEVAIVVGGRNFFCGDAWVNATGLDRPIAYQIGMMATVMNSILLQSALEKLGIQARVQSAFAMPEVVEPYSRQKAIRHLEKGRVVIFGGVGAGTGNPLFTTDTAAALRASELDADALLKGTSDSGVYDCHASSENVIVDHISFRDVVSRGITSMDMMALAYCEENGIPVVIFNLLGPGSISRALCGDQVGTLIDQAGRIS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00634 519 Pfam Myb/SANT-like DNA-binding domain 125 226 IPR044822 -
Pte9g00634 519 Gene3D - 273 518 IPR036393 -
Pte9g00634 519 PANTHER URIDYLATE KINASE 122 518 - -
Pte9g00634 519 Hamap Uridylate kinase [pyrH]. 279 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pte9g00634 519 MobiDBLite consensus disorder prediction 1 120 - -
Pte9g00634 519 Coils Coil 179 206 - -
Pte9g00634 519 Pfam Amino acid kinase family 283 492 IPR001048 -
Pte9g00634 519 CDD AAK_UMPK-PyrH-Ec 282 513 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pte9g00634 519 SUPERFAMILY Carbamate kinase-like 279 512 IPR036393 -
Pte9g00634 519 FunFam Aspartate/glutamate/uridylate kinase family protein 128 202 - -
Pte9g00634 519 MobiDBLite consensus disorder prediction 25 109 - -
Pte9g00634 519 Gene3D - 128 202 - -
Pte9g00634 519 FunFam Uridylate kinase isoform A 273 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00634 Pte-Chr9 10378761 10381256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00634 105 233 Trihelix Transcription Factor Family AT3G14180 37.692 2.13e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte9g00634 AA_kinase 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00634 - - qsa:O6P43_004948 766.533