Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00609 ATGGATTTCCAGGTTGTGGTTTTGGCAGGTGGTTTCTCAAAGAAACTTGTTCCTCTCGTTTCGAAGGAGGTTCCAAAAGCTTTACTTCCAATAGCCATTAGACCTGTCATTTCCTATGTTCTGGAGCAACTAGAACTCAGTAATATTAAAGATATTATTGTGGTTGTCGAAGGGCAAGATGCCGCCCTTCTTGTCGGTGGATGGATATCAGGGGCTTATGTTGATCGCCTTCATGTTGAGGTTGCTGCAGTTCCTGAGGACGTTGGCACGGCAGGCGCACTTCGAGCCATTGCCCACCACCTCACTTCTAATGATGTTTTGGTAGTGAGTGGAGATCTTGTCTCTGATGTCCCACTTGGTGCTGTTGCAGCTGCTCATAGACGGCATGATGCGGCAGTGACTGCAATGCTTTGCCAGGCTCCCATTAGCGGGCTTTCAGATTCTGCTTCTTCTGGTGGAAAGGACAAATCAAAGAAAGCAGCTCGTTACAACTTAATAGGGCTAGACCCGAAGAAGCAATTTTTACTTTACATTGCCACAGGAGCTGAAGTTGAGAAAGATCTTCGAGTGCAGAAAAGCATACTGCGTGCTGTTGGCCAGATGGAAATACGAGTGGATCTCATGGATGCTCACTTGTATGCTTTCAAGAGATCTGTTTTGCAGGAAGTTCTTGATAAAAAAGATAAATTTACTAGCGTGAAACATGATGTAGTACCATACCTTGTTCGCACTCAACTGAATTCAGAGATTTCAATAAATGGAACATCACACTCAGAAGAAAATGGAAATGGGAAGCCTAGTTCTTGGAAGAATCAACAAATATTATCAGAAATCCTGGCCAATGCATCCCCACCAAGCTTTCATCAACTATACTCACGGGGACATAATGGTTCTTCACCTTTTTGTAGAACCCATAAATGCTGTGTTTATATTGCCAATAGTGGCACGTACTGTGCACGCTTAAATTCAACCCAAGCATTTAGTGATATCAATCGCGATTTAGTAGGAGAGGCGAGTCATTTGTCAGGGTATTCCTTCTCTGCGCAAAACAATATCATCCATCCTTCAGTGGAGCTTGGAGCAAAAACTACAGTTGGTCCACACTGTATGTTGGGCGAAGGTTCCCAAATGGGTGACAAGTGCAGTGTAAAACGTTCTGTTATTGGACGGCACTGTCGGATAGGTTCAAATGTAAAGGTTGTGAATTCTGTGGTTATGAATCACGTTACCATTGGGGATGGTTGTTCAATCCAAGGTTCTGTCATATGCAGCAATGCACAGCTCCAAGATCGTGTTGTACTCAAAGATTGTCAAGTTGGTGCAAGTTATGTCGTTACATCTGGAAGTGAATGCAAAGGGGAAGCCTTGTCTAGGAAAGAGAAATGA 1386 0.4372 MDFQVVVLAGGFSKKLVPLVSKEVPKALLPIAIRPVISYVLEQLELSNIKDIIVVVEGQDAALLVGGWISGAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTSNDVLVVSGDLVSDVPLGAVAAAHRRHDAAVTAMLCQAPISGLSDSASSGGKDKSKKAARYNLIGLDPKKQFLLYIATGAEVEKDLRVQKSILRAVGQMEIRVDLMDAHLYAFKRSVLQEVLDKKDKFTSVKHDVVPYLVRTQLNSEISINGTSHSEENGNGKPSSWKNQQILSEILANASPPSFHQLYSRGHNGSSPFCRTHKCCVYIANSGTYCARLNSTQAFSDINRDLVGEASHLSGYSFSAQNNIIHPSVELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQDRVVLKDCQVGASYVVTSGSECKGEALSRKEK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00609 461 Gene3D Hexapeptide repeat proteins 362 451 - -
Pte9g00609 461 Pfam Nucleotidyl transferase 6 138 IPR005835 GO:0009058
Pte9g00609 461 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 460 - -
Pte9g00609 461 CDD LbH_eIF2B_gamma_C 370 450 - -
Pte9g00609 461 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 350 IPR029044 -
Pte9g00609 461 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 426 IPR029044 -
Pte9g00609 461 CDD eIF-2B_gamma_N 3 220 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00609 3 450 Eukaryotic Initiation Factors Gene Family AT2G34970 24.841 1.02e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00609 K03241 - zju:107410292 730.709