Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00592 ATGGAGGATTCCACTCAATCGTTTCATTCTTCTTCTTCAAGCTTATGTGGGATTGCTTCTCTGTCAGCTTCATCGTCTTCTTCTGCATCTTTTGATGACAGTATCGATGACTCCTGCAGCATTTGCCTTGAACCCTTCAGCATTGATGATCCCGCCAGTATTACCAATTGCAAGCATGAATACCATCTGCACTGCATTCTTGACTGGTCCCAGAGAAGCTTAGAGTGCCCAATATGTTGTCGATTGCTTGTCTTAAGTGATCCATCAAGCCAAGAGCTTTTAGCTCCAGTGGAGGCTACAAGGCATTCAAGGACAAGGAACGTAGCTTCTTCCATGTTCACTAATGACAGCCCTGAACATGATAGTTCGGATTCAGATGATCCAGATATACATGAAGAAATTATGCAGCACCTTATAGTGGTGAATGGAGATCAATATGTTTGTGGAGGAGAAGGGCAAAGATCTGGAACGATTTCTCCACATATTCTTGTTTTAAACTCATCAGCTTATGCATCTGGCATCCAACCTCTAAACTCACCACTCCAATTAGGAAACAACTATCCAGTTCCTATGGCACCTTCTGGGGTTAATATTGAACCTTCCCCATCTGCCACTGGATTGGTGAGAAGTACAACTTCTGGTGGGATAGATGTCCCTTTTGATCAAAGCCAGCCTCCAGCTGAGACTCCTGGTAGACTAAATACTTCTGAGGTGTTCGCATTCCCAGAGACCATTAAATCTAAATTCACTGCTGCTTCGGCTAGATACAAGGAATCAATCTCAAAAAGCACTCGAGGCCTGAGAGAGAAGTTACTTGCTCATAATAGCTCTGTCAAAGAGTTGAGTAAAGGAGTTCAGCGGGAGATGAATGCAAGCATAGCTGGATTGGCAAGAATGATTGAACGCCTTGAACTTTCATCAAAGAGGACATCACCTTCTTCTCCTGCCGCCAGCTTAAACGGTGGATCTTCAAGTACCCTCTTTAAAGGAAAGAACTTACAAGAAAATGTCAATGATCAGCCCCATAGTGAAGATAGCATGGTTTTTGTTCCTGATTTAAGTTCGGCTGCAACCTCACATTGCTCTAGCATGGTTTCTTGTCCCATGGAAGTACGTCCAGCACATTTGGATGGCGGACATTGA 1143 0.4374 MEDSTQSFHSSSSSLCGIASLSASSSSSASFDDSIDDSCSICLEPFSIDDPASITNCKHEYHLHCILDWSQRSLECPICCRLLVLSDPSSQELLAPVEATRHSRTRNVASSMFTNDSPEHDSSDSDDPDIHEEIMQHLIVVNGDQYVCGGEGQRSGTISPHILVLNSSAYASGIQPLNSPLQLGNNYPVPMAPSGVNIEPSPSATGLVRSTTSGGIDVPFDQSQPPAETPGRLNTSEVFAFPETIKSKFTAASARYKESISKSTRGLREKLLAHNSSVKELSKGVQREMNASIAGLARMIERLELSSKRTSPSSPAASLNGGSSSTLFKGKNLQENVNDQPHSEDSMVFVPDLSSAATSHCSSMVSCPMEVRPAHLDGGH* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00592 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 17 84 IPR013083 -
Pte9g00592 380 MobiDBLite consensus disorder prediction 306 329 - -
Pte9g00592 380 MobiDBLite consensus disorder prediction 105 129 - -
Pte9g00592 380 Pfam Ring finger domain 37 79 IPR001841 -
Pte9g00592 380 ProSiteProfiles Zinc finger RING-type profile. 39 79 IPR001841 -
Pte9g00592 380 SMART ring_2 39 79 IPR001841 -
Pte9g00592 380 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 24 87 - -
Pte9g00592 380 SUPERFAMILY RING/U-box 36 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00592 Pte-Chr9 8947709 8951937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00592 31 87 C3H Transcription Factor Family AT4G23450 47.368 5.99e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00592 K19043 - qsa:O6P43_021605 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00592 9 8947709 8951937 Pte9g00592 9 8947709 8951937 RCT