Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00578 ATGGTCAGAAAGAGCTTCAGGTGCATGGAGCTCAATTCTGAATTCAGCAGATTAATGCTACAGGGTTCCATTTTAGTATTGTGCTCAATGATCCTAATGGTGCGGTGTCAGGACATCAGTGACTATGATGGCATCGGCAATTCTTCAATTTCTGCTGTTACACAGCTCGCATATCGCCGTCTTACCAATATGACTTTCGCTGTTAATCAACAACTTGTTGAAAAGTCAAGCTTCTGTGTCAATGACCCAGAAGATGATTGGAACAGAGCATTCAACTTCTCGTCTAATTTGGGATTCGTATCTTCTTGTATTGAGGAGACTAGAGGAGATTTCGCAGGACGGCTGTGTACAGCAGCTGAAATAAAGTCCTACTTTGACAGTCTCCTTGAGAGAACAGGCAATGGAAACAATGCCAATTACTTGAAGCCTAACAGGAACTGTAATTTGACCAACTGGGTTGATGGCTGTGAACCAGGATGGGCCTGTAGTGCTGGACTTAACGTGCGGTTGGACTTTGACTTTCAGAACTTACAGGTCATACCTGAAAGAACTTCAAACTGTCGAGCCTGCTGTGAGGGCTTCTTCTGTCCTCATGGTATTACTTGTATGATACCCTGTCCATTGGGGTCTTATTGTCCTTCTGCAACACTCAACTCAACGACAGGCGTCTGTGAACCATACCTTTACCAGCTCCCTCCTGGAAAGCCAAACCATACATGCGGTGGTGCAAATATTTGGTCTGCTGCTAGTCTGAGTAGTGACATGTTTTGCCCATCTGGATCATATTGCCCTACAACTACAGAAAAATTTGCATGTGGAGAAGGAAGCTATTGCAGGATGGGTTCCACGGCTGAGAACAAATGCTACAGACTGAATTCATGTGATACCAATTCCTCGAAGCAAAATATTCAATTATATGGAGCTATGCTCATTGCTGTACTGAGTGGTTTGCTACTCTTGATCTACAACTGTTCTGACAAAGTCTTGACTATCCGGGAAAGGAGGCTCGCGAAATCCAGAGAAAGAGCTGCTAGGATTGCAAGGGAAACTGCACAAGCTCGTCAAAGATGGAGAGTTGCCAAAGATGCTGCAACAAAGCAATCTAGGGAGCTGCAAGCTCAATTTTCTCGTACCTTAGCCCGCAAGTCATATTTTGAAACAGAAAAAGAACAGTCTTCACCGTTACGAGTTGTGCCCACATCCTCATCTACCATGGTGAATGGAGAACGAAAGAAGCCTGTTGAACTCATGAGTGTGATACATGAAATTGAAGATGGCCATTATATTACAGATGAGGAGAATATTTTATCTGAGGTCAAGAGTCTCCCAAAGGATGTTGAAGTACAAAAGAAAAAACTGCACTCTCATAGTCAAATCTTCAAATATGCTTACTCTGAACTTGAAAAAGAGAATGCCCGACAGCATGATAACAAAGGCCTGACTTTCTCAGGAGTAATTAAAATGGCAACTGATACTAATAAGAAAAAAAGGCCTCTGATTGAGATAGCTTTCAAGGATCTGACTCTATCACTGCAAACGAAAAACAAGCATCTGTTAAGATGTGTTACTGGGACAATTAAACCTGGTCGTATTACTGCAGTCATGGGTCCCTCAGGTGCTGGAAAAACTACATTGCTTTCTGCAATAGCAGGAAAAGTTTTTGGATGCAGAATGACTGGTTCCGTTCTCATCAATGGAAAGAATGATTCAATTCATTCTTACAAGAAAATTATAGGGTTTGTGCCTCAAGATGACATAGTTCATGGAAATTTGACTGTAGAAGAAAATCTTTGGTTCAGTGCTAAATGCAGGCTATCTGCTGACTTACTGAAACCAGATAAAGTTCTAATAGTGGAAAGAGTCATTCAATCTTTGGGGCTTCAAGCAGTGAGAGACTCCTTGGTTGGGACAGTGGAAAAGAGAGGAATCTCTGGAGGCCAAAGAAAGCGAGTAAATGTGGGAATAGAAATGGTTATGGAACCTTCACTTCTGATTTTGGATGAACCAACTTCTGGTTTAGATAGTGCATCATCTCAGTTGCTTCTTAAAGCACTCAGACGCGAAGCACTTGAGGGAGTGAATATCTCTCTAGTGGTTCACCAACCAAGTTATGCATTGTTCAAGATGTTCGATGATTTGATACTTTTGGCTAAAGGCGGTCTTGTGGTCTACCATGGATCAGTCAACAATGTTGAGGAGTATTTCGCAGGCCTTGGTATTGATATTCCAGACCGCGTGAACCCTCCAGACTACTTCATTGATATTTTGGAGGGCATAGTTGTACCTGGTGGAAGCTTGGGCATAAGCAGCAAGGATCTTCCTGTCAGGTGGATGCTCTACAAGGGGTACCCTGTACCTCCTGACATGCGCAACGATGTCGATTCCATATCTTCTGCAGGAATATATCACAACAATATGATGATTCATAGTGAAAGTGACATTGATCAAACTTTTGCTGGAGAATTGTGGCAAGATGTTGTGACTAATGTGGAGACTCAGAAAGACAAGCTCAGGTTTAACTTTCTGAAGTCCAAGGATTTATCGCATAGAAGAACCCCCGGTATAATCATGCAATATTGGTATTTCCTCTCCAGAGTTAGTAAGCAGCGATTGCGGGAAGCGAAAACCGAAGCTGTAGATTATTTAATATTGTTACTTGCAGGAGCCTGCTTAGGATCACTAGCTAAAATGAGTGACGAAAATATGGGGGCAGCTGCATACACTTACACTGTCATTGCAGTTTCTCTATTATGTAAAATCGCGGCTTTGAGATCATTCTCCCAAGATAAACTTCAGTATTGGAGGGAAAGAAATTCTGGGATGAGCAGCTTTGCTTATTTTCTCTCCAAGGATACACTTGACCACTTTAATACTGTGATCAAGCCTGTGGTTTATCTCTCCATGTTCTATTTCTTCACAAACCCAAGATCTACTTTCACAGAGAATTATACAGTTTTGCTCTGCCTTGTATATTGTGTAACTGGCATAGGCTACGCATTTGCAATCCTATTTGAGCCTGGTGCAGCCCAGCTTTGGTCAGTACTTATTCCTGTTGTTTTGACACTCGTTTCCACGCAAATAAACAACAATAAATTCTTGAAGTTCATAGCGGATTTGTGCTATCCTAAGTGGGCTCTGGAAGCATTTGTAATTTCCAATGCTAAAAGGTATTATGGAGTGTGGCTTATAACCCGTTGTGGTGTGCTCTCGAAAAGTGGATACAATGTTCATGATTGGACTTTATGTATATCTGTACTCATCCTCATAGGTGTAGTCAGTCGCGCCATAGCATTCTCTTCCATGTTGATATTCCGCAAGAAATGA 3324 0.42 MVRKSFRCMELNSEFSRLMLQGSILVLCSMILMVRCQDISDYDGIGNSSISAVTQLAYRRLTNMTFAVNQQLVEKSSFCVNDPEDDWNRAFNFSSNLGFVSSCIEETRGDFAGRLCTAAEIKSYFDSLLERTGNGNNANYLKPNRNCNLTNWVDGCEPGWACSAGLNVRLDFDFQNLQVIPERTSNCRACCEGFFCPHGITCMIPCPLGSYCPSATLNSTTGVCEPYLYQLPPGKPNHTCGGANIWSAASLSSDMFCPSGSYCPTTTEKFACGEGSYCRMGSTAENKCYRLNSCDTNSSKQNIQLYGAMLIAVLSGLLLLIYNCSDKVLTIRERRLAKSRERAARIARETAQARQRWRVAKDAATKQSRELQAQFSRTLARKSYFETEKEQSSPLRVVPTSSSTMVNGERKKPVELMSVIHEIEDGHYITDEENILSEVKSLPKDVEVQKKKLHSHSQIFKYAYSELEKENARQHDNKGLTFSGVIKMATDTNKKKRPLIEIAFKDLTLSLQTKNKHLLRCVTGTIKPGRITAVMGPSGAGKTTLLSAIAGKVFGCRMTGSVLINGKNDSIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAKCRLSADLLKPDKVLIVERVIQSLGLQAVRDSLVGTVEKRGISGGQRKRVNVGIEMVMEPSLLILDEPTSGLDSASSQLLLKALRREALEGVNISLVVHQPSYALFKMFDDLILLAKGGLVVYHGSVNNVEEYFAGLGIDIPDRVNPPDYFIDILEGIVVPGGSLGISSKDLPVRWMLYKGYPVPPDMRNDVDSISSAGIYHNNMMIHSESDIDQTFAGELWQDVVTNVETQKDKLRFNFLKSKDLSHRRTPGIIMQYWYFLSRVSKQRLREAKTEAVDYLILLLAGACLGSLAKMSDENMGAAAYTYTVIAVSLLCKIAALRSFSQDKLQYWRERNSGMSSFAYFLSKDTLDHFNTVIKPVVYLSMFYFFTNPRSTFTENYTVLLCLVYCVTGIGYAFAILFEPGAAQLWSVLIPVVLTLVSTQINNNKFLKFIADLCYPKWALEAFVISNAKRYYGVWLITRCGVLSKSGYNVHDWTLCISVLILIGVVSRAIAFSSMLIFRKK* 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00578 1107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 735 IPR027417 -
Pte9g00578 1107 FunFam ABC transporter G family member 24 496 738 - -
Pte9g00578 1107 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 452 1094 - -
Pte9g00578 1107 Gene3D - 487 738 IPR027417 -
Pte9g00578 1107 SMART AAA_5 528 720 IPR003593 GO:0016887
Pte9g00578 1107 Pfam ABC transporter 521 671 IPR003439 GO:0005524
Pte9g00578 1107 ProSitePatterns ABC transporters family signature. 643 657 IPR017871 GO:0005524|GO:0016887
Pte9g00578 1107 Pfam ABC-2 type transporter 700 1107 IPR043926 GO:0140359
Pte9g00578 1107 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 502 744 IPR003439 GO:0005524
Pte9g00578 1107 CDD ABCG_EPDR 500 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00578 Pte-Chr9 8674512 8681043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00578 491 703 Calmodulin-binding Proteins AT2G36910 28.899 1.06e-14 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00578 - - zju:107413721 1470.68