Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00542 ATGGAATACAATGTGAAAACTTCAACTGCAACATCCCCACTGCCTTCCAACAATGCTGTTCAAACTCACTTGCTCTCTACATTATCTCCTTCTCCATCTTCACCTCCTTCATCTTCATCTCCTGCTTGTTCTCAATTGTCCCCAACTACTCCTAACGCTTCTGCTCATCAAGCTGCGTCTCCTACAGTACCTACAGTTGTTGTTAGCCCCTGTGCAGCCTGCAAGATCCTGCGTCGTAGATGTGTTGAGAAATGTGTTTTAGCTCCATATTTCCCTCCCACTGATCCATTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCCAGCAATATCATCAAATTCTTGCAGGAACTTCCAGAGGGTCAGAGAGCAGATGCAGTAAGCAGTATGGTTTATGAAGCCAATGCTAGGATTAGAGACCCAGTGTACGGCTGTGCTGGAGCAATATTTCAACTTCAAAAGCAAGTTGGTGAGCTACAAGGACAATTAGCCAAAGCACAAGCAGATCTTGTCAACATGCAATGCCAACAAGCCAATTTGGTCGCACTAATTTGCATGGAAATGAGTCAATCACGAGAGCAGATGATGGTACAGCCTCAATCTCAACACACCGACATGACCTGTTTCTTAGATGAGAATCCGGGCACTGCTTGGGAGTCCCTTTGGACATGA 672 0.4539 MEYNVKTSTATSPLPSNNAVQTHLLSTLSPSPSSPPSSSSPACSQLSPTTPNASAHQAASPTVPTVVVSPCAACKILRRRCVEKCVLAPYFPPTDPFKFTIAHRVFGASNIIKFLQELPEGQRADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVGELQGQLAKAQADLVNMQCQQANLVALICMEMSQSREQMMVQPQSQHTDMTCFLDENPGTAWESLWT* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00542 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 69 201 - -
Pte9g00542 223 Pfam Lateral organ boundaries (LOB) domain 70 167 IPR004883 -
Pte9g00542 223 Coils Coil 149 176 - -
Pte9g00542 223 MobiDBLite consensus disorder prediction 1 59 - -
Pte9g00542 223 ProSiteProfiles LOB domain profile. 69 170 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00542 Pte-Chr9 7208435 7209935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00542 66 223 AS2 family AT1G07900 66.871 2.44e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte9g00542 LOB 2.2e-40 No_clan