Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00539 ATGGGGAAGAAGAGTTGGTTTTCTGCTGTAAAGAAAGTTCTAAGTCCAGACTCCAAGGAGAAGAAGGACCAGTTGACAAAGCACAGTGGCAGTAAATCTAAGAGGAAATGGTTTGGAAAAAGCAAGCACACTGGTCAAATACTTTCAACTGAGAAGGAGGAGGTGTTGGCGGTTCCTCCCCCTCTTACAACAATAGAGGATACTAAACTCATTGAGGCTGAAAATGAACAAAGCAAGCATGCTTATTCTGTTGCACTCGCCACCGCTGTTGCTGCTGAGGCTGCTGTTGCAGCTGCTCAGGCTGCTGCAGAGGTTGTTCGTCTAACTTCCGTGGCTCGTATTACTGGAAAGTCAAGTGAAGAAATAGCAGCAATCAGGATCCAGGCAGCTTTCAGAGGATACATGGCAAGAAGGGCATTCCGGGCCTTGAAAGGTTTAGTGAGGTTAAAAACCTTGATACAAGGACAATCTGTTCAAAGGCAAGCAAAAACAACGCTCAAATGTATGCAAACGCTTTCTCGGCTCCAATCTCAGATTCGTGCTAGGAGGATTAGAATGTCTGAGGAAAATCAGGCTCTCCAGAGGCAACTACAGCAGAAACGTGAAAAAGAACTCGACAAGTCACAAACTTCTGTCAACCGGGTTGAAGATTGGAACCATAGCCCTGGATCAAGGGAGCAAGTGGAAAAGAAGATACTCAGCAAGCAAGAAGCTGCCATTCGAAGAGAAAGAGCTTTGGCCTATGCATACTCACATCAGCAAATGTGGAAGAATGCTTCAAAATCTGCAAATCCAACATTTATGGATCCGAGCAACCCTCATTGGGGTTGGAGTTGGCTTGAACGATGGATGGCAGCCAGGCCATGGGAGAATCGGAGCACCACTTATAATAATAATGACCATGCATCTGTGAGGAGTGGGGCAACAAGTCATGCCCCTTCTCTTGGAGAAATCAGTAGATCAAATTCTCTTTGTGAAAAGCCTTCCCCTGCTGGCAAAAGATCGAGTCGACCTTCCAGTCGCCAATCACCTTCATCTGCACCTTCAAAGGCTCCATCTTCATCATCAAATGCTGGAAAAATAAAGCCTCCAAGTCCTAAAGGAAGTAGTAGTATATGGGGTGGTGATGATGACTCAAGGAGTATGTTCAGTATGCAGTCAGAACGGCACAGGAGGTATAGCATAGGAGGCTCATCTGTGCTAGATGACGAGAGCTTTGCTAGCTCCCCTGCATTTCCGAGTTATATGACACCCACACAGTCAGTAAAGGCCAAGTCTAAGATGTCGAGCTCAGTGAGGTCAGAGAAAAATGGAACCCCAGATAAGGCATCTGTCAGTAGTACTGCAAAGAAAAGACTCTCCTTCCCTAGCTCTCCTGCTGGTTCAAGGAGACATTCCTTGCCCCCCAAGTTGGATATTAGCCCTGTCAAGAACAAAGAAATAATGACAGAAGAGAAAGCTGCCAACAGAAGAATCAGGTAG 1482 0.4609 MGKKSWFSAVKKVLSPDSKEKKDQLTKHSGSKSKRKWFGKSKHTGQILSTEKEEVLAVPPPLTTIEDTKLIEAENEQSKHAYSVALATAVAAEAAVAAAQAAAEVVRLTSVARITGKSSEEIAAIRIQAAFRGYMARRAFRALKGLVRLKTLIQGQSVQRQAKTTLKCMQTLSRLQSQIRARRIRMSEENQALQRQLQQKREKELDKSQTSVNRVEDWNHSPGSREQVEKKILSKQEAAIRRERALAYAYSHQQMWKNASKSANPTFMDPSNPHWGWSWLERWMAARPWENRSTTYNNNDHASVRSGATSHAPSLGEISRSNSLCEKPSPAGKRSSRPSSRQSPSSAPSKAPSSSSNAGKIKPPSPKGSSSIWGGDDDSRSMFSMQSERHRRYSIGGSSVLDDESFASSPAFPSYMTPTQSVKAKSKMSSSVRSEKNGTPDKASVSSTAKKRLSFPSSPAGSRRHSLPPKLDISPVKNKEIMTEEKAANRRIR* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00539 493 MobiDBLite consensus disorder prediction 477 493 - -
Pte9g00539 493 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Pte9g00539 493 Coils Coil 183 206 - -
Pte9g00539 493 MobiDBLite consensus disorder prediction 295 364 - -
Pte9g00539 493 MobiDBLite consensus disorder prediction 295 493 - -
Pte9g00539 493 SMART iq_5 119 141 IPR000048 GO:0005515
Pte9g00539 493 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Pte9g00539 493 PANTHER IQ-DOMAIN 5-RELATED 1 470 - -
Pte9g00539 493 MobiDBLite consensus disorder prediction 14 45 - -
Pte9g00539 493 MobiDBLite consensus disorder prediction 190 229 - -
Pte9g00539 493 MobiDBLite consensus disorder prediction 401 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00539 Pte-Chr9 7165405 7168627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00539 1 472 IQD Protein Family AT5G03040 47.314 5.34e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00539 - - tcc:18586349 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00539 9 7165405 7168627 Pte9g00539 9 7165405 7168627 RCT