Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00534 ATGGGCAAGGAGAAATTTCACATCAACATTGTGGTCATTGGCCATGTCGACTCAGGGAAGTCAACCACCACCGGTCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTGATCGAGAGGTTTGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTTCTGGACAAGCTCAAGGCTGAGCGTGAGCGCGGTATCACCATTGACATTGCCCTGTGGAAGTTCGAGACCACCAAGTACTACTGCACTGTCATCGATGCCCCTGGACATCGCGACTTTATCAAGAATATGATCACTGGAACATCTCAGGCTGACTGTGCCGTCCTCATCATCGATTCCACCACTGGTGGTTTCGAAGCCGGTATCTCCAAGGATGGTCAAACTCGGGAGCATGCTCTGCTTGCATTCACCCTCGGTGTGA 436 0.5069 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00534 145 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 145 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 FunFam Elongation factor 1-alpha 1 145 - -
Pte9g00534 145 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 61 76 IPR031157 -
Pte9g00534 145 Gene3D - 1 145 IPR027417 -
Pte9g00534 145 Pfam Elongation factor Tu GTP binding domain 7 145 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 145 IPR027417 -
Pte9g00534 145 PRINTS GTP-binding elongation factor signature 88 98 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 PRINTS GTP-binding elongation factor signature 68 76 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 PRINTS GTP-binding elongation factor signature 104 115 IPR000795 GO:0003924|GO:0005525
Pte9g00534 145 PANTHER TRANSLATION FACTOR 4 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00534 Pte-Chr9 7117568 7118003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00534 1 145 Eukaryotic Initiation Factors Gene Family AT1G07930 100.000 2.00e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00534 K03231 - cit:102613486 295.049