Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00494 ATGGATGTGGAGTCTAAGAAACCTTCCTCCCACCCCCCTCAACCACAAATAGGCACGACAAACACCATTCAATCTCCTTCACCACCCAGTCCAATAGGAACGTTGATCCTTGTTGCTTCTATTGCTGCCGGAATTCAATTCGGTTGGGCACTTCAGCTGTCACTGCTAACGCCATATGTCCAACTCCTCGGTATTCCTCACACATGGGCTGCCTTCATTTGGCTCTGTGGTCCAATCTCTGGTATGGTTGTGCAGCCTATTGTTGGCTTTCACAGCGATCACTGCACCTCTCGCTTTGGTCGCCGCCGTCCTTTCATTGCTGCCGGTGCTATATTTGTGGCTATCGCTGTCTTCCTCATCGGCTATGCGGCCGACATCGGCCACCATGCCGGGGATTCCTTAGTGAAATCTAGTAAACCTCGTGCCATAGCTGTCTTTGTCGTCGGTTTCTGGATCCTTGATGTAGCCAACAATATGTTGCAAGGTCCTTGTCGTGCCCTCCTAGCCGATCTTTCATCAACCGATTCTAAAAAAACACGAACAGCCAACGCTTTCTTCTCTTTCTTCATGGCTATCGGAAACGTTCTTGGTTATGCAGCTGGTTCATACACTCGCTTATACAAAATTTTCCCATTCACAAAAACCAAAGCATGTGATCTCTACTGTGCAAACCTTAAAAGCTGTTTCTTTCTCTCCATTGCATTGCTTGCTTCCCTTACCGCCGTAGCGCTGTTTTTTGTGAAAGAGAAACCATGGTCACCCCCAGCAAAGGGAAACACCGCCGGCGAAGACGAAGATGATGAAGCTGAGAGTGGTGGTAGGACATGCAGGATGCCATTTTTTGGAGAAATAATCGGTGCATTCAAGGACTTGAAGAAGCCCATGTGGATTCTACTATTAGTGACATGTTTAAATTGGATTGCTTGGTTCCCATTCTTGCTGTTCGACACGGACTGGATGGGGAGGGAGGTTTACGGAGGCAAAGTTGGTGGCCAGGGAAATCAAGATAAGCTGTACGATCTCGGAGTCCGTACCGGTGCATTGGGATTGATGTTGAATTCTGTGGTGTTAGGGGTGACATCTTTAGGTGTAGAGGTGCTGGCCCGTGGGGTTGGTGGGGTGAAGAGATTGTGGGGAATTGTGAATTTCCTGCTTGCTATTAGTCTGGCAATGACAGTGTTGGTCACCAAGATTGCCGCCTCATCGCGGCGCTACGAGGTAGTTGGAGGCGGGGCACGGCAGTTAATGCCGCCACCGGTGGGGGTGAAAGCCGGGGCGTTGACATTGTTTTCTGTACTGGGTGTGCCTCTTGCGATAACATATAGCATCCCTTTTGCTCTAGCATCAATCTTTTGCTGCAATGCTGGAGCAGGCCAAGGACTTTCTTTGGGAGTTCTGAATCTTTCCATTGTGATACCACAGATGGTGGTGTCAGTTCTAAGTGGCCCTTGGGACGCACTATTTGGTGGCGGCAACTTACCGGCATTTGTCGTGGGAGCGGTGGCTGCCGCCGCGAGTGGGGTAATCGTGTTGACTATGCTTCCATCACCGCCTCCGGACGTTCCATCGTCGAAAAATGCACCTGCAGCAGTGCCTTTCCATTGA 1605 0.5009 MDVESKKPSSHPPQPQIGTTNTIQSPSPPSPIGTLILVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMVVQPIVGFHSDHCTSRFGRRRPFIAAGAIFVAIAVFLIGYAADIGHHAGDSLVKSSKPRAIAVFVVGFWILDVANNMLQGPCRALLADLSSTDSKKTRTANAFFSFFMAIGNVLGYAAGSYTRLYKIFPFTKTKACDLYCANLKSCFFLSIALLASLTAVALFFVKEKPWSPPAKGNTAGEDEDDEAESGGRTCRMPFFGEIIGAFKDLKKPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGKVGGQGNQDKLYDLGVRTGALGLMLNSVVLGVTSLGVEVLARGVGGVKRLWGIVNFLLAISLAMTVLVTKIAASSRRYEVVGGGARQLMPPPVGVKAGALTLFSVLGVPLAITYSIPFALASIFCCNAGAGQGLSLGVLNLSIVIPQMVVSVLSGPWDALFGGGNLPAFVVGAVAAAASGVIVLTMLPSPPPDVPSSKNAPAAVPFH* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00494 534 NCBIfam sucrose/proton symporter 31 519 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pte9g00494 534 SUPERFAMILY MFS general substrate transporter 35 518 IPR036259 -
Pte9g00494 534 MobiDBLite consensus disorder prediction 254 274 - -
Pte9g00494 534 MobiDBLite consensus disorder prediction 1 27 - -
Pte9g00494 534 FunFam Sucrose transport protein 29 514 - -
Pte9g00494 534 Pfam MFS/sugar transport protein 43 246 - -
Pte9g00494 534 CDD MFS_SLC45_SUC 35 496 - -
Pte9g00494 534 PANTHER SUGAR TRANSPORTER 34 513 - -
Pte9g00494 534 Gene3D MFS general substrate transporter like domains 33 517 IPR036259 -
Pte9g00494 534 MobiDBLite consensus disorder prediction 9 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00494 Pte-Chr9 6202844 6205739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00494 10 535 Sucrose Transporter Gene Family AT1G22710 66.729 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00494 K15378 - rcu:8262746 790.415