Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00464 ATGGAAAATACTGCTGTTCTTCTTCACATTCTCAATCGGCCTTCTCTGTTGTTTTGCGCACTCATTTTCTGTGTGGCCTTGTCAATGGCACCAGTAGCTTCTCTTTCACCTGATGGACAAGCCCTTTTGTCTCTTCTTTCTTCTGCCGACTCTTTCGCTAAATCCTCCTCCTCCGTACTTTCCTCATGGAACCCTTCGAGCTCAACGCCTTGCTCATGGCATGGTGTGACTTGTTCTCCACAAGACAGAGTCATCTCTCTCTCACTACCAAACACTTTCCTCAACCTTTCCTCTATACCTCTTCAACTCTCTTCTCTTTCATCTCTGCAACTACTCAACCTCTCATCCACCAATATCTCTGGTTCGATCCCATCATCCTTTGGCAAACTCATTCACCTTCGTCTCCTTGACCTGTCCTCAAACTCTCTCACTGGTTCCATTCCATCAGAGCTTGGCAAGCTCTCTTCACTTCAGTTTCTTCTGCTAAACTCAAACAGTTTGTCTGCAAACATTCCTCCACAGCTTGCCAATCTTACTGCACTTCAAGTACTTTGTCTCCAAGACAATATGATCAACGGGACAATCCCATCTCAACTGGGTTCTCTAGCATCTCTTCAGCAACTTCGTATTGGGGGTAATCCGTATCTCACCGGAGAAGTTCCGTCACAGTTGGGATTACTGACCAATCTCACCACATTTGGTGCAGCTGCCACCGGACTTTCTGGCGTCATACCTCCAACTTTTGGAAACTTGGTTAATCTGCAAACCTTGGCGCTTTACGACACTGACATGTTCGGTTCCATACCACCGGAACTTGGGTCGTGTTCTGAGCTAAGAAACCTGTACTTGCACATGAATAAGCTGACTGGTTCTATCCCACCTCAACTAGGCAAGTTGCAGAAGCTTACTAGCTTGCTTCTATGGGGTAATGCATTATCTGGTCCAATACCAGCTGAGCTTTCTAACTGTTCGTCCCTTGTTATTCTTGATGTCTCTGGCAATGACCTCTCTGGTGAAATTCCGGGTGACTTGGGGAAGTTGGTGGTTCTTGAACAGCTTCATCTGTCAGATAATTCTCTCACAGGGACAATACCAATGGAGCTGAGCAACTGTACAAGCCTCACTGCTCTTCAGCTTGACAAGAATCAGATTTCTGGTGCAATTCCGTTGGAGTTTGGTAAGTTGAAGAATTTGCAATGCTTTTTCTTGTGGGGTAACTCTGTTTCTGGGACCATACCTACTTCTTTTGGAAACTGTAGTGAACTGTATGCACTTGACCTTTCTAGGAATAAGCTCACAGGGTCTATACCAGAAGAGATTTTCAGTTTGCAGAAGCTGAGTAAGCTTCTGCTTCTTGGGAATTCATTAACAGGAGGGCTGCCAAAAAGTGTTGCAAACTGTCAGTCCTTAGTGAGGTTGAGGCTTGGGGAGAATCAGCTTTCAGGGTTGATTCCCAAAGAGATTGGTCAATTGCAGAATTTGGTCTTCCTTGACTTGTACATGAACCATTTCTCTGGAGGCCTTCCATGGCAAATTTCCAATATCACAGTTCTTGAATTATTAGATGTCCACAACAATCACATTACTGGTGAAATCCCCTCTGAGCTTGGAGAGCTTGTAAACCTGGAGCAGCTTGATCTAAGCAGAAATAGTTTGACAGGTGAAATACCGCAGAGCTTTGGGAACTTCAGTTACTTGAACAAGCTCATTCTTAATAACAATTTACTGACAGGTTCGGTTCCAAAATCTTTTAAGAATTTGCAAAAGTTAACACTGTTGGATTTGAGTTACAACAGTTTCTCAGGGGTTATTCCACCAGAGATTGGCTACATTACAAGTTTAACAATTAGTCTAGACTTGAGTTCAAATGGTTTTACAGGAGAAATCCCAGAATCAATGTCTGGTTTGACACAGTTACAATCACTCGATCTTTCAAATAATATGCTATATGGAGGAATAAAGGTGCTTGGTTTTCTAACTAGTCTTACAACTTTGAATATTTCTTTCAATAATTTCTCTGGCCCGATTCCGGTGTCTCCATTCTTCAGAACTCTGTCTTCAAATTCGTATATTCAGAACTCAAACCTTTGCGAGTCAGTTGATGGAAACACGTGTTCTTCAAGTTTTTTCCGCAGAAATTCTTTGAAGTCCGCGAAAACCATCGCCCTGGTATGCGTTATCCTGGCATCAGTTGCTATTATTCTCATTGCATCATGGATTCTTATGACTAGGAATCACAAATACATGGTCGAGAAATCGTTGGGCATATCAGCCACTTCTTCCCGGGGTGAAGATTTCTCCTACCCTTGGACATTTATCCCATTTCAAAAACTTAATTTCACCATTGATAACATCCTAAATAGCTTGAAAGATGAAAACGTGATTGGAAAGGGTTGCTCAGGTGTCGTATATAAAGCTGAAATGCCTAATGGGGAGTTGATTGCAGTGAAGAAGCTTTGGAAAGCAAAGCAGGAAGAGGAAATAATAGTAGATTCATTTGCTGCAGAAATTCAGATTCTGGGACACATTCGGCATCGGAATATAGTGAAGCTCTTAGGTTATTGTTCTAATAAGAGTGTCAAGCTCCTCCTTTACAACTTTATTTCAAATGGTAATTTACAGCAGCTGCTGCAAGGAAACAGAAACCTTGATTGGGAAACAAGGTACAAGATTGCAGTAGGTTCAGCACAAGGCTTAGCCTATCTTCATCATGATTGCATGCCACCAATACTTCACAGAGATGTCAAGTGCAATAACATTCTATTAGATTCCAAGTTTGAGGCTTATCTTGCAGATTTTGGACTTGCAAAGTTGATGAATTCTCCAAATTACCACCACGCAATGTCCAGAGTGGCTGGTTCATATGGCTACATTGCTCCAGAGTATGGATACACCATGAACATAACAGAAAAAAGTGATGTGTATAGTTATGGAGTGGTGTTGCTGGAGATACTAAGTGGACGCAGTGCAGTTGAGTCCAAGGTAGGAGATGGGCAACACATAGTTGAATGGGTGAAAAAGAAAATGGGAAGCTTTGAACCTGCTGTTTCGATTTTAGATGCAAAGCTCCAGGGATTACCAGACCAAATGGTGCAGGAGATGCTGCAAACACTTGGAATTGCCATGTTTTGTGTAAACTCTTCACCTGCAGAACGGCCTACAATGAAGGAAGTGGTAGCCTTGCTGATGGAGGTGAGGAGCCCTCCAGATGAAACTGGAAAGACTTCTCAGCCTCTAATGAAGCAGTCCTCAACTCAAAGTTGA 3264 0.4268 MENTAVLLHILNRPSLLFCALIFCVALSMAPVASLSPDGQALLSLLSSADSFAKSSSSVLSSWNPSSSTPCSWHGVTCSPQDRVISLSLPNTFLNLSSIPLQLSSLSSLQLLNLSSTNISGSIPSSFGKLIHLRLLDLSSNSLTGSIPSELGKLSSLQFLLLNSNSLSANIPPQLANLTALQVLCLQDNMINGTIPSQLGSLASLQQLRIGGNPYLTGEVPSQLGLLTNLTTFGAAATGLSGVIPPTFGNLVNLQTLALYDTDMFGSIPPELGSCSELRNLYLHMNKLTGSIPPQLGKLQKLTSLLLWGNALSGPIPAELSNCSSLVILDVSGNDLSGEIPGDLGKLVVLEQLHLSDNSLTGTIPMELSNCTSLTALQLDKNQISGAIPLEFGKLKNLQCFFLWGNSVSGTIPTSFGNCSELYALDLSRNKLTGSIPEEIFSLQKLSKLLLLGNSLTGGLPKSVANCQSLVRLRLGENQLSGLIPKEIGQLQNLVFLDLYMNHFSGGLPWQISNITVLELLDVHNNHITGEIPSELGELVNLEQLDLSRNSLTGEIPQSFGNFSYLNKLILNNNLLTGSVPKSFKNLQKLTLLDLSYNSFSGVIPPEIGYITSLTISLDLSSNGFTGEIPESMSGLTQLQSLDLSNNMLYGGIKVLGFLTSLTTLNISFNNFSGPIPVSPFFRTLSSNSYIQNSNLCESVDGNTCSSSFFRRNSLKSAKTIALVCVILASVAIILIASWILMTRNHKYMVEKSLGISATSSRGEDFSYPWTFIPFQKLNFTIDNILNSLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKAKQEEEIIVDSFAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNFISNGNLQQLLQGNRNLDWETRYKIAVGSAQGLAYLHHDCMPPILHRDVKCNNILLDSKFEAYLADFGLAKLMNSPNYHHAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESKVGDGQHIVEWVKKKMGSFEPAVSILDAKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVRSPPDETGKTSQPLMKQSSTQS* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00464 1087 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 35 198 - -
Pte9g00464 1087 MobiDBLite consensus disorder prediction 1070 1087 - -
Pte9g00464 1087 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 688 1074 - -
Pte9g00464 1087 SUPERFAMILY L domain-like 57 409 - -
Pte9g00464 1087 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 437 709 - -
Pte9g00464 1087 SMART serkin_6 789 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00464 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Pte9g00464 1087 Pfam Protein kinase domain 791 1059 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00464 1087 Pfam Leucine Rich repeat 322 339 IPR001611 GO:0005515
Pte9g00464 1087 Pfam Leucine Rich repeat 660 674 IPR001611 GO:0005515
Pte9g00464 1087 ProSiteProfiles Protein kinase domain profile. 789 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00464 1087 Pfam Leucine rich repeat 541 599 IPR001611 GO:0005515
Pte9g00464 1087 Pfam Leucine rich repeat 397 456 IPR001611 GO:0005515
Pte9g00464 1087 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Pte9g00464 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 770 867 - -
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 389 484 IPR032675 -
Pte9g00464 1087 SUPERFAMILY Protein kinase-like (PK-like) 768 1062 IPR011009 -
Pte9g00464 1087 PRINTS Leucine-rich repeat signature 636 649 - -
Pte9g00464 1087 PRINTS Leucine-rich repeat signature 133 146 - -
Pte9g00464 1087 Gene3D Transferase(Phosphotransferase) domain 1 868 1082 - -
Pte9g00464 1087 Gene3D Phosphorylase Kinase; domain 1 764 867 - -
Pte9g00464 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 214 436 - -
Pte9g00464 1087 ProSitePatterns Protein kinases ATP-binding region signature. 795 818 IPR017441 GO:0005524
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 196 290 IPR032675 -
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 291 388 IPR032675 -
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 581 706 IPR032675 -
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 37 195 IPR032675 -
Pte9g00464 1087 Gene3D Ribonuclease Inhibitor 485 580 IPR032675 -
Pte9g00464 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 868 1080 - -
Pte9g00464 1087 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Pte9g00464 1087 SUPERFAMILY L domain-like 288 685 - -
Pte9g00464 1087 SMART LRR_typ_2 154 177 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 347 371 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 587 611 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 106 129 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 130 153 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 419 443 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 636 660 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 539 562 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 299 323 IPR003591 -
Pte9g00464 1087 SMART LRR_typ_2 178 202 IPR003591 -
Pte9g00464 1087 MobiDBLite consensus disorder prediction 1066 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00464 Pte-Chr9 5648991 5652674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00464 31 1066 Receptor kinase-like Gene Family AT5G56040 45.177 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte9g00464 Pkinase 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00464 - - qsa:O6P43_008050 1673.29