Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00446 ATGTACTTGCTAAAGGTGGCAAACCCAGGAGGCTCAAATGAATATGTCAAGTTCACAGGACAACTTGGCACCAGCAGTGGACGACGTGGTGGCGGTAGCGGTGAGGAAGAAGTTAACAGATATGCATCACATGAATTCGAAGTCGAAGCATCAGGAAGCTCACAAGTAGGTCAACAGTCATCACAAGAATTGAACCTACAAACACATCCAATGATGTCGGGACAGAGAGGCAGTGATTGGGCGTATAGAAGTTGTTTTCCTATGACATCAGGTTTCTTACAGACTGCTTCACCAGTTTTATCTGCATATTCTTCTTCTGCGGGCTCTGGTTTGGGTTCAATTTCTTTTGGCTCTGGTTTTGGACAAAAGAGAAGGCGTGAGGAAGATCAGAGTGGTCCTTCTCAGTGGATAGACCCTTCATCTAAAGTTTACAGAGTTCATGGTGATCACAGAGCATCGTCACAAGGAGAAGCATCATCAGTCAGAGAAGAAGCTACCACGACAACACAAAGCACTGAAGCTACCCCATCATGTGAGACTGAGACTGCTTCACATGAAGAAACGCGAGAACGAAGAAGATACAGAGGAGTGAGACAGAGACCATGGGGGAAATGGGCTGCTGAAATTCGTGATCCCCACAAGGCTGCTAGAGTCTGGCTTGGAACATTTGACACTGCTGAGGCTGCAGCAACAGCCTACGATGAAGCTGCTTTGAGATTTAGAGGTAACAAAGCAAAGCTTAATTTTCCAGAGAATGTAAGATCAGTACAGCCAATTCAGGATTTCCCGGCTACAGCAACAAGGTTGGTCATGTCGGATTCTCCTGCAACCCAAACACTGCAGTCATTGCGGCCATTGCAGCCATCGTTTGTTCAGCCTCAAGGGTTTCAAGGGTCTTCTTCTGATTTTCTTAGGGACTGTTTGGAATATTCCCAGTTGTTACAAAGCACGGGTGATTTCAATGGACAACAACAGGAACAACCTGCAAGTTTGTTGGAACAATTGTACTACAGTTCGCAAATGGCTTCTCTTCAGTCGTCAGTGGTACCATCATCATCAACAACTTCATCATCTTTGTCTTCATTACCTTCCTATGCACCTTCTGGTTCTTCATCCTCTGTTTCGTTTCCTTTATTCCAAAATCCACAGATAGATTATCTTCGACCCCAAGAAAATCAGAGCTGGGCTAGAAGTGTATCAGAGTTTTCTAATTCTCCGTGGTCAGATTCCAGTCACTATCTTCCTCCCTCATCCAGTGGATGA 1263 0.4521 MYLLKVANPGGSNEYVKFTGQLGTSSGRRGGGSGEEEVNRYASHEFEVEASGSSQVGQQSSQELNLQTHPMMSGQRGSDWAYRSCFPMTSGFLQTASPVLSAYSSSAGSGLGSISFGSGFGQKRRREEDQSGPSQWIDPSSKVYRVHGDHRASSQGEASSVREEATTTTQSTEATPSCETETASHEETRERRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAATAYDEAALRFRGNKAKLNFPENVRSVQPIQDFPATATRLVMSDSPATQTLQSLRPLQPSFVQPQGFQGSSSDFLRDCLEYSQLLQSTGDFNGQQQEQPASLLEQLYYSSQMASLQSSVVPSSSTTSSSLSSLPSYAPSGSSSSVSFPLFQNPQIDYLRPQENQSWARSVSEFSNSPWSDSSHYLPPSSSG* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00446 420 Gene3D AP2/ERF domain 192 252 IPR036955 GO:0003700|GO:0006355
Pte9g00446 420 Pfam AP2 domain 193 242 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 SMART rav1_2 193 256 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 MobiDBLite consensus disorder prediction 153 179 - -
Pte9g00446 420 MobiDBLite consensus disorder prediction 18 39 - -
Pte9g00446 420 CDD AP2 201 252 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 PANTHER DNA-BINDING DOMAIN 160 346 IPR044808 GO:0003700|GO:0009873
Pte9g00446 420 ProSiteProfiles AP2/ERF domain profile. 193 250 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 MobiDBLite consensus disorder prediction 180 194 - -
Pte9g00446 420 MobiDBLite consensus disorder prediction 401 420 - -
Pte9g00446 420 FunFam Ethylene-responsive transcription factor 2 192 251 - -
Pte9g00446 420 PRINTS Ethylene responsive element binding protein signature 194 205 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 PRINTS Ethylene responsive element binding protein signature 216 232 IPR001471 GO:0003700|GO:0006355
Pte9g00446 420 MobiDBLite consensus disorder prediction 118 195 - -
Pte9g00446 420 SUPERFAMILY DNA-binding domain 193 251 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00446 Pte-Chr9 5386577 5389150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00446 192 267 AP2-EREBP Transcription Factor Family AT2G33710 77.632 8.27e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00446 AP2 5.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00446 - - qsa:O6P43_004169 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00446 9 5386577 5389150 Pte9g00446 9 5386577 5389150 RCT