Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00434 ATGCTCGGAGCAGACTCAACTCTATTGGAGAGATCCGGCGACGCTGTGATGGCGGAAGCTGCTGTGAAGGCTCAGCATGAAGGTGGTGAAAGTGAGACTGAAGCTGTCGGTGTAAGGCCAAATAATAATAATAATTCAGGCGATGATCAAGACAAGAGTGCAGCTGCGGTTAAAGGTGATGAAGGTGACAAGGTCAATTGTGGTGGAAACCGGTGGCCCCGGCAAGAGACTTTGGCCCTCTTGAAGATAAGGTTGGAGATGGATGCTGCCTTTCGTGATTCAAGTTCGAAAGGTCCACTATGGGAAGAGGTTGCAAGGAAACTAGCCCAGCTTGGCCATAAAAGAAGTGCCAAGAAGTGCAAGGAAAAATTCGAGAATGTCTACAAGTACCATAAGAGAACCAAAGAAGGTCGTGGTGGTAAACCTGAGGGTAAGACCTATAAATTCTTTGATGAGTTACAAGCCCTTGAAAATCAATTCACACTTTCTCATCCAAAACCACAACCCTCTCTTTTAACATCGGAACTCGTTCCTACTAAGAATACTGAATCATCAAAACTCTCTCATGTCACTACAACCAACCCCACAATCTTTTCCCCACCGCCAATGCCAGTACCAACAACAAACCCTACCATTACTTTTTCCACAGCACCGACCACCACAACAATGAATTCTAGAATCCCTCCTGTACAAAATTCTTATCCATTTCCGGTACCGAACATGTCAGTGAACTTGTTCACTAGCGCTTCGACTTCGTCGTCCACAGCATCCGATGAAGGATTAGAAGAGAGGTATAGGAAGAAAAGGAAATGGAAGGACTACTTCAGGAGGCTGACAAGGAAAATGATAGTGAAGCAAGAAGAAATGCAGAAGATATTCTTGGAAGCCATAGACAAACGCGATCAAGAACGAATGGCTCGAGAAGAAGCATGGAGGGTGCAGGAGATGGGGAGAATCAATAGAGAACATGAAATCCTAGTACAAGAAAGATCAACTGCTGCAGCCAAAGATGCAGCCGTCATTGCTTTCTTACAGAAGCTCTCTGGTCAACAGAATCCAATACTACAACCGCGTTCTCAATCACAACCACAACAGCAAGCAGTAGAGGTACCAACGATTCAGCAGCAGCAAATTCAGCTGCAGCCCCCAAGGGAAGCAGTAGTGGCACCAGCTGCTGCAATCAATGTTGGGGTTTCAAAAATGGAGAATGGTGATAGTGCTGGTCCTGCAAGTTCTTCTAGGTGGCCAAAGACTGAAGTTCATGCTTTAATAACGTTAAGGACAAGTCTTGATTCTAAGTATCAAGAGAATGCTCCGAAGGGGCCATTGTGGGAGGAGATATCAAAGGGCATGAAGAGGCTTGGATATAACAGAAACGCCAAGAGGTGTAAGGAGAAGTGGGAGAATATCAACAAGTATTTCAAGAAAGTGAAAGAAAGCAATAAGAAAAGGCCTGAGGATTCAAAGACATGTCCTTACTTTCACCAACTAGAAGCTATATACAAGGATAAGAGTAAAACTTCGTCAGAAAATTCAATTGAGGATTCATTTCACGATGTTTCAAAGCAAAACAGCATGATGGAGCCATTGATGGTTCAACCGGAACAGCAATGGCGGCCACCTCACCATGAACAGAAGCAGCAGCAGCAGCAGCTACCATCGTTCATGGAAGGATTCAGAGTTGAGAATAACAGTTACCAATATCAGAATAAAGAAAGAGATCAGGATAATGAAGATGACGATGGGGATGACGATGAAGATAATGATGACAACGATGATGAAGACACAGTGGAAGATGAAGGACTAGGCAGTTACGAGATCACAACCAATAAACTCGCTTCATTTAACACAGTCGAATGA 1860 0.4414 MLGADSTLLERSGDAVMAEAAVKAQHEGGESETEAVGVRPNNNNNSGDDQDKSAAAVKGDEGDKVNCGGNRWPRQETLALLKIRLEMDAAFRDSSSKGPLWEEVARKLAQLGHKRSAKKCKEKFENVYKYHKRTKEGRGGKPEGKTYKFFDELQALENQFTLSHPKPQPSLLTSELVPTKNTESSKLSHVTTTNPTIFSPPPMPVPTTNPTITFSTAPTTTTMNSRIPPVQNSYPFPVPNMSVNLFTSASTSSSTASDEGLEERYRKKRKWKDYFRRLTRKMIVKQEEMQKIFLEAIDKRDQERMAREEAWRVQEMGRINREHEILVQERSTAAAKDAAVIAFLQKLSGQQNPILQPRSQSQPQQQAVEVPTIQQQQIQLQPPREAVVAPAAAINVGVSKMENGDSAGPASSSRWPKTEVHALITLRTSLDSKYQENAPKGPLWEEISKGMKRLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLEAIYKDKSKTSSENSIEDSFHDVSKQNSMMEPLMVQPEQQWRPPHHEQKQQQQQLPSFMEGFRVENNSYQYQNKERDQDNEDDDGDDDEDNDDNDDEDTVEDEGLGSYEITTNKLASFNTVE* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00434 619 MobiDBLite consensus disorder prediction 182 196 - -
Pte9g00434 619 MobiDBLite consensus disorder prediction 53 67 - -
Pte9g00434 619 MobiDBLite consensus disorder prediction 543 566 - -
Pte9g00434 619 SMART sant 68 130 IPR001005 -
Pte9g00434 619 SMART sant 411 473 IPR001005 -
Pte9g00434 619 MobiDBLite consensus disorder prediction 36 51 - -
Pte9g00434 619 FunFam Trihelix transcription factor GT-2 72 133 - -
Pte9g00434 619 Pfam Myb/SANT-like DNA-binding domain 70 156 IPR044822 -
Pte9g00434 619 Pfam Myb/SANT-like DNA-binding domain 413 500 IPR044822 -
Pte9g00434 619 FunFam Trihelix transcription factor GT-2 415 476 - -
Pte9g00434 619 PANTHER FI21293P1 40 549 - -
Pte9g00434 619 MobiDBLite consensus disorder prediction 19 70 - -
Pte9g00434 619 Gene3D - 415 476 - -
Pte9g00434 619 Gene3D - 72 133 - -
Pte9g00434 619 CDD GT1 70 135 - -
Pte9g00434 619 ProSiteProfiles Myb-like domain profile. 70 128 IPR001005 -
Pte9g00434 619 MobiDBLite consensus disorder prediction 576 601 - -
Pte9g00434 619 MobiDBLite consensus disorder prediction 535 619 - -
Pte9g00434 619 CDD GT1 413 478 - -
Pte9g00434 619 ProSiteProfiles Myb-like domain profile. 413 471 IPR001005 -
Pte9g00434 619 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00434 Pte-Chr9 5233511 5236593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00434 62 537 Trihelix Transcription Factor Family AT1G76890 51.569 1.08e-146 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte9g00434 Myb_DNA-bind_4 4.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00434 - - gsj:114370603 612.453