Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00433 ATGCTGGGGGACTCGACTGTGTTAGGAGCTGCGGTAGGCAGCTCTGCAGCTGGAGGAGCAGGAGAAGGAGGAAGCCATGAAGGTGGTGAGACCTCAGCTGCTGCTGCAGCTGGAGGTCCAGGTGGAGTGGGATCCAATTCAGGTGATGATGAAAGAGGTGGAAGAGGTGAAGAAGGTGATAGAAGTTTCGGTGGCAACCGGTGGCCTCGTCAGGAAACTTTGGCACTCTTGCAGATACGGTCTGATATGGACGTATCTTTCAGAGATGCAAGTGTGAAAGGTCCCTTGTGGGAAGAAGTTTCCAGAAAGCTAGCAGAACTTGGATACAATCGAAGTGCTAAAAAGTGCAAGGAGAAATTCGAAAACGTGTACAAGTATCACAGGAGAACCAAAGAAGGCCGGACCGGCAAGCCCGACGGCAAGGCCTATCGTTTTTTTGATCAATTAGAAGCTCTTGAAACCCTTCCATCAATGCAATCATCATCAATTACACCTTCAAAGCCACAGGCTGCCTTGCAGGCAACTCCGTTGTCAGTGAATACCGCAGTGGCAACAGCAATGGCTTCAATGCCTAACACCAATAGTGCTACTCCTGTTGTTCCTCATGTCACTGTTCCATCAACAACGACGACGATCCCGATGACTATGTCTCAAGGCATTGGTAACCCATCAATGAACATGACATTTTCTTCATACCCGCCGCCGCCGCCACAAGCAAACCCTACAAATCTCCCAACATCAATAACAAACCCTACCTATCCTCATCTTCATGCCACAATTCCAAGCACTGCATTCCAAAGCATCCCGACCGATATGCTGTCGAATTCTAGCTCTTCTTCTACGTCTTCAGATGAAGAATTGGAAGGGCGGAGAAAGAGGAAGAGGAAATGGAAGGACTTCTTTGAGAGACTAATGAAGGAGGTGATTGACAAGCAAGAGAATCTGCAGAAGCGATTCTTGGAAGCGATCGAGAAACGCGAGCACGATCGTATGGTGCGAGAAGAAGCTTGGAGGTCGCAGGAAATGGAGAGGATCAATAGAGAGCGTGAAATTTTGGCACAAGAAAGGTCCATTGCTGCTGCTAAGGATGCAGCAGTGATGTCATTTTTGCAGAAGATAGCTGAACAGCATAACCTTGGAACGGCATTGAATAACATCAATCTTCCACAACCTCCGCCACCGCCTCCACCTCCCGTGCAGCAACAACCAATTCATATCACTCCACCACCGCAGGCACATCCACAGCCATTTCTTCAGCCGCAGCAGAAGCAGGCCGTAGCTCCTACACAACAACATCTATCTCAACCAGTGGCAACAAACATAGTGTCAAACTTGGAATTGACTAAGGCAGGCAATTCTGATCAGAATGTCTTGCCGGCAAGTTCTTCAAGATGGCCGAAAGTTGAGGTTCAAGCTTTGATAAAGCTACGCAAAAGTTTGGATGCCAAGTACCAAGAGAACGGACCAAAAGGACCACTGTGGGAGGAAATCTCAGCAGCCATGAGAAAACTTGGTTACAATAGGAATGCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAATATTTCAAGAAAGTCAAAGACAGCAACAAGAAGAGGCCAGAAGATTCAAAGACATGCCCGTATTTCCATCTCCTGGATGCTCTATATAAAGAGAAGAATACGTTTGATAATTCATCAGCTGCGGATGATCAGTTGAAACCAGAGAGCTTGATGAGTACTGGTGCACCTTTGATGGTACGACCCGAGCAGCAATGGCCACCCCAGCAAGACATGCGGCCGGAGACTGGACACGGGCAAGGACCAGATGTGTCGATGGAAGACTTGGAGGGACACCATGAGGATGATGATGAAGATGACGAGGACAAGGATGGAGATGATGAAGATGAAGAAGATGAAGGAGGATGTAACTTTGAGATAGTGGCAAGTAAACCAGCTTCAATGGGAACAGCTGAGTGA 1962 0.4781 MLGDSTVLGAAVGSSAAGGAGEGGSHEGGETSAAAAAGGPGGVGSNSGDDERGGRGEEGDRSFGGNRWPRQETLALLQIRSDMDVSFRDASVKGPLWEEVSRKLAELGYNRSAKKCKEKFENVYKYHRRTKEGRTGKPDGKAYRFFDQLEALETLPSMQSSSITPSKPQAALQATPLSVNTAVATAMASMPNTNSATPVVPHVTVPSTTTTIPMTMSQGIGNPSMNMTFSSYPPPPPQANPTNLPTSITNPTYPHLHATIPSTAFQSIPTDMLSNSSSSSTSSDEELEGRRKRKRKWKDFFERLMKEVIDKQENLQKRFLEAIEKREHDRMVREEAWRSQEMERINREREILAQERSIAAAKDAAVMSFLQKIAEQHNLGTALNNINLPQPPPPPPPPVQQQPIHITPPPQAHPQPFLQPQQKQAVAPTQQHLSQPVATNIVSNLELTKAGNSDQNVLPASSSRWPKVEVQALIKLRKSLDAKYQENGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKDSNKKRPEDSKTCPYFHLLDALYKEKNTFDNSSAADDQLKPESLMSTGAPLMVRPEQQWPPQQDMRPETGHGQGPDVSMEDLEGHHEDDDEDDEDKDGDDEDEEDEGGCNFEIVASKPASMGTAE* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00433 653 MobiDBLite consensus disorder prediction 417 432 - -
Pte9g00433 653 Coils Coil 298 318 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 268 283 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 268 293 - -
Pte9g00433 653 Pfam Myb/SANT-like DNA-binding domain 66 152 IPR044822 -
Pte9g00433 653 Pfam Myb/SANT-like DNA-binding domain 463 550 IPR044822 -
Pte9g00433 653 SMART sant 64 126 IPR001005 -
Pte9g00433 653 SMART sant 461 523 IPR001005 -
Pte9g00433 653 MobiDBLite consensus disorder prediction 611 637 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 12 69 - -
Pte9g00433 653 CDD GT1 463 528 - -
Pte9g00433 653 Gene3D - 465 526 - -
Pte9g00433 653 Gene3D - 68 129 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 581 653 - -
Pte9g00433 653 CDD GT1 66 131 - -
Pte9g00433 653 FunFam Trihelix transcription factor GT-2 465 526 - -
Pte9g00433 653 FunFam Trihelix transcription factor GT-2 68 129 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 50 65 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 383 432 - -
Pte9g00433 653 ProSiteProfiles Myb-like domain profile. 463 521 IPR001005 -
Pte9g00433 653 PANTHER FI21293P1 31 604 - -
Pte9g00433 653 MobiDBLite consensus disorder prediction 387 416 - -
Pte9g00433 653 ProSiteProfiles Myb-like domain profile. 66 124 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00433 Pte-Chr9 5196865 5200035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00433 64 596 Trihelix Transcription Factor Family AT1G76890 47.645 4.66e-142 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte9g00433 Myb_DNA-bind_4 6.9e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00433 - - qsa:O6P43_004191 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00433 9 5196865 5200035 Pte9g00433 9 5196865 5200035 RCT