Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00425 ATGGACCTGAGGTTCAACATTGGGAAATCGCCGACGACATCCTTCGATATAGACCACGTGCCGGAGACCCCTCAGCGAGGGACCCACCACCGCAGGTCCCACTCCGATACTTCCTTCCATTTCGCAACTTCCAACCTCGACGACCTGCTCTTGTTCCACAATTCCGACCTGGACTTCTCTGCTTTTGCTTCGCCGAGTCTGACCACCACCACGACCCATAGTTCAGCTCATCCACATGCGATTCCCATGGTCATTGACTCGCTCGCTAAATCCAACTCCAATAATATGTCTTCGGATGAGTCAAGTGGTCAACCGATTTACATACCTGGTCAGTCTCGACCACCCCATGGTCATCTTCGGAGCCTCTCGATGGACTCCGATTTTTTTGAGGGGTTGACCCTTAAGGATGGGTTTTCCGGCAATGTTTCTGGGGAGAAGAGGTGTGTCAGCCATAGGCACAGCAATTCTGTGGATGGTTTACCGGCGTCTTTTGAAGCCGAGTCGTCTCTAGATGCTGTCTTTGACAGTGCCAAGAAGGCCATGGGGGACGACAAACTAGCTGAGCTTGCTCTTATGGACCCCAAAAGAGCCAGAAGGATTCTTGCAAATAGGCAATCTGCTGCTCGATCTAAAGAGCGGAAAATTCGTTACACTAGTGAGCTGGAAAGGAAGGTTCAGACTCTTCAGAATGAAGCGACAACTCTCTCTGCTCAGGTCACCGTGCTCCAGAGAGACACAACTGGTATGACTGCTGAAAATAAAGAGCTCAAACTGCGATTGCAAGCCATGGAGCAGCAAGCAAAACTTAGAGATGATCTAAATGAAGCATTGAAGGGAGAACTGCAACACCTTAAAATAGCAGCATGCCATGTTGCTGCAGTCAATGGCAATCCTTTCGGCAGGGGTTTATCTCCTCAGTACCCCGCATCCCAACCAGCTTCACATCAGTTTCACAACCCCCAAGCCCAGCAATCAGGTAATATGAGGCCTTTGTCATCTTCTGACAATCAGCCATTCAACAGGCAGGCCCACCCTAGCTTTATGGACTTCAATCAGAGGACTTAG 1065 0.4995 MDLRFNIGKSPTTSFDIDHVPETPQRGTHHRRSHSDTSFHFATSNLDDLLLFHNSDLDFSAFASPSLTTTTTHSSAHPHAIPMVIDSLAKSNSNNMSSDESSGQPIYIPGQSRPPHGHLRSLSMDSDFFEGLTLKDGFSGNVSGEKRCVSHRHSNSVDGLPASFEAESSLDAVFDSAKKAMGDDKLAELALMDPKRARRILANRQSAARSKERKIRYTSELERKVQTLQNEATTLSAQVTVLQRDTTGMTAENKELKLRLQAMEQQAKLRDDLNEALKGELQHLKIAACHVAAVNGNPFGRGLSPQYPASQPASHQFHNPQAQQSGNMRPLSSSDNQPFNRQAHPSFMDFNQRT* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00425 354 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 23 332 - -
Pte9g00425 354 SUPERFAMILY Leucine zipper domain 195 246 IPR046347 GO:0003700|GO:0006355
Pte9g00425 354 MobiDBLite consensus disorder prediction 302 354 - -
Pte9g00425 354 CDD bZIP_plant_RF2 196 245 IPR044759 GO:0003700|GO:0006355
Pte9g00425 354 Gene3D - 194 247 - -
Pte9g00425 354 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 193 256 IPR004827 GO:0003700|GO:0006355
Pte9g00425 354 Pfam bZIP transcription factor 195 247 IPR004827 GO:0003700|GO:0006355
Pte9g00425 354 MobiDBLite consensus disorder prediction 90 108 - -
Pte9g00425 354 MobiDBLite consensus disorder prediction 307 354 - -
Pte9g00425 354 FunFam Transcription factor VIP1 194 247 - -
Pte9g00425 354 SMART brlzneu 191 255 IPR004827 GO:0003700|GO:0006355
Pte9g00425 354 Coils Coil 218 266 - -
Pte9g00425 354 MobiDBLite consensus disorder prediction 90 120 - -
Pte9g00425 354 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00425 Pte-Chr9 5115616 5119460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00425 8 353 bZIP Transcription Factor Family AT1G43700 49.176 3.88e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte9g00425 bZIP_1 5.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00425 K20557 - qsa:O6P43_004198 369.777