Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00422 ATGGAAAAGGCATTCGCTCGAAATGAGGGATCATGGTCTCGCTCTTCAATTTTTCCAAATTCTCATGCATCTGTTGAGAAATTACTTTTAGAAGCCAAGCAGGGAGACTGGGAAATAGACCTGAGACTTTTGAAAATGGGAGATCGTATTGCATCTGGATCTTGCGGTGATCTTTTCCATGGAGTTTATCTGGGTGAAGATGTTGCCGTCAAGATTATCAAATCTGAGCATCGAAATAATGCCCTTGAGAATGAGTTCAAGCAGGAAGTAGCGATTCTCAGACAGGTCCATCACAAAAATGTTGTTCGTTTCATTGGAGCAAGTACAAACTCTCCACAGTTGTGCATAGTGACAGAGTTTATGCCTGGAGGAAGTCTGTATGATTACTTGCATAAAACTCGTAATGCATTGGAGCTATCTCAACTACTGAAGTTCGCTATTGATGTCAGCAAGGGTATGGAGTATTTGCATAAAAATAATATAATTCACAGGGATCTGAAGACTGCAAATCTTCTAATGGACACTCACAATGTTGTTAAGGTTGCAGACTTTGGAGTTGCTCGATTCCTAAATCAGGGTGGAGTAATGACAGCAGAAACTGGAACATATAGATGGATGGCACCGGAGGTTATAAACCACCAACCCTATGATCAGAAAGCAGACGTTTTCAGTTTTTCCATAGTTCTGTGGGAACTTGTGACAGCGAAGGTACCGTATGATACCATGACTCCACTGCAAGCTGCCTTGGGTGTGAGACAGGGACTTCGCCCAAATCTCCCAAATAGTACTCATCCCAAATTGTTAGAATTGATGCAAATGTGTTGGGATGCAATTCCAAGCAAGCGGCCTTCCTTTTCTGAGATAACCAATGAACTGGAAAATCTCCACCAAGAAATTCAGAAACTTTCTGAAGTAAACGGTGCATGA 927 0.4186 MEKAFARNEGSWSRSSIFPNSHASVEKLLLEAKQGDWEIDLRLLKMGDRIASGSCGDLFHGVYLGEDVAVKIIKSEHRNNALENEFKQEVAILRQVHHKNVVRFIGASTNSPQLCIVTEFMPGGSLYDYLHKTRNALELSQLLKFAIDVSKGMEYLHKNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPNLPNSTHPKLLELMQMCWDAIPSKRPSFSEITNELENLHQEIQKLSEVNGA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00422 308 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 37 298 - -
Pte9g00422 308 SMART serkin_6 44 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00422 308 Coils Coil 285 305 - -
Pte9g00422 308 Pfam Protein tyrosine and serine/threonine kinase 44 292 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 PRINTS Tyrosine kinase catalytic domain signature 220 242 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 PRINTS Tyrosine kinase catalytic domain signature 201 211 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 PRINTS Tyrosine kinase catalytic domain signature 118 131 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 PRINTS Tyrosine kinase catalytic domain signature 155 173 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 PRINTS Tyrosine kinase catalytic domain signature 263 285 IPR001245 GO:0004672|GO:0006468
Pte9g00422 308 Gene3D Phosphorylase Kinase; domain 1 33 121 - -
Pte9g00422 308 FunFam Serine/threonine-protein kinase isoform 1 34 122 - -
Pte9g00422 308 ProSiteProfiles Protein kinase domain profile. 44 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00422 308 SUPERFAMILY Protein kinase-like (PK-like) 36 298 IPR011009 -
Pte9g00422 308 PIRSF ILK 10 305 - -
Pte9g00422 308 Gene3D Transferase(Phosphotransferase) domain 1 122 307 - -
Pte9g00422 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pte9g00422 308 CDD STKc_MAP3K-like 50 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00422 Pte-Chr9 5098530 5103726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00422 36 299 MAP Kinase Kinase Kinase AT4G35780 62.264 3.61e-121 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pte9g00422 PK_Tyr_Ser-Thr 1.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00422 - - gmx:100797987 506.908