Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00415 | ATGGTTGTCGAGGTCTCCACCGCCAAGACTGGAAAGCATGGTCATGCAAAATGCCACTTTGTTGCTATTGATATTTTCACCGGAAAGAAGCTCGAGGATATTGTGCCATCTTCTCACAATTGTGATGTGTGTTTTGTCGAAATATTTTCTGAGTTTTGTTTGTTGACTTGTAAATTTGTAATATGCGATTCATTGGCAATTTTGTTTTTTTTTTTAATTCAGGTTCCCCATGTCAATCGTACTGATTATCAGCTAATTGATATTTCAGAAGATGGTGTTGTGAGCTTCCTGACTGAAAACGGAAATACGAAGGATGATCTTAGGCTCCCGACTGATGATAACCTTCTTGGTCAGGTTAGGTAA | 363 | 0.3857 | MVVEVSTAKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVCFVEIFSEFCLLTCKFVICDSLAILFFFLIQVPHVNRTDYQLIDISEDGVVSFLTENGNTKDDLRLPTDDNLLGQVR* | 121 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00415 | 120 | Gene3D | - | 78 | 120 | IPR012340 | - | |
Pte9g00415 | 120 | SUPERFAMILY | Nucleic acid-binding proteins | 78 | 119 | IPR012340 | - | |
Pte9g00415 | 120 | ProSitePatterns | Eukaryotic initiation factor 5A hypusine signature. | 10 | 17 | IPR019769 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte9g00415 | 120 | SUPERFAMILY | Translation proteins SH3-like domain | 2 | 43 | IPR008991 | - | |
Pte9g00415 | 120 | Pfam | Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold | 77 | 119 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte9g00415 | 120 | Gene3D | - | 1 | 44 | IPR014722 | - | |
Pte9g00415 | 120 | SMART | eIF_5a_2 | 77 | 120 | IPR020189 | GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905 | |
Pte9g00415 | 120 | PANTHER | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER | 2 | 119 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Pte9g00415 | 120 | PIRSF | Transl_init_eIF5A | 1 | 56 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 | |
Pte9g00415 | 120 | PIRSF | Transl_init_eIF5A | 71 | 120 | IPR001884 | GO:0003723|GO:0003746|GO:0043022|GO:0045901 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00415 | Pte-Chr9 | 5016467 | 5017406 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00415 | 2 | 120 | Eukaryotic Initiation Factors Gene Family | AT1G13950 | 63.025 | 9.23e-46 | 144 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00415 | K03263 | - | pvy:116115236 | 154.451 |