Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00415 ATGGTTGTCGAGGTCTCCACCGCCAAGACTGGAAAGCATGGTCATGCAAAATGCCACTTTGTTGCTATTGATATTTTCACCGGAAAGAAGCTCGAGGATATTGTGCCATCTTCTCACAATTGTGATGTGTGTTTTGTCGAAATATTTTCTGAGTTTTGTTTGTTGACTTGTAAATTTGTAATATGCGATTCATTGGCAATTTTGTTTTTTTTTTTAATTCAGGTTCCCCATGTCAATCGTACTGATTATCAGCTAATTGATATTTCAGAAGATGGTGTTGTGAGCTTCCTGACTGAAAACGGAAATACGAAGGATGATCTTAGGCTCCCGACTGATGATAACCTTCTTGGTCAGGTTAGGTAA 363 0.3857 MVVEVSTAKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVCFVEIFSEFCLLTCKFVICDSLAILFFFLIQVPHVNRTDYQLIDISEDGVVSFLTENGNTKDDLRLPTDDNLLGQVR* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00415 120 Gene3D - 78 120 IPR012340 -
Pte9g00415 120 SUPERFAMILY Nucleic acid-binding proteins 78 119 IPR012340 -
Pte9g00415 120 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 10 17 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Pte9g00415 120 SUPERFAMILY Translation proteins SH3-like domain 2 43 IPR008991 -
Pte9g00415 120 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 77 119 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Pte9g00415 120 Gene3D - 1 44 IPR014722 -
Pte9g00415 120 SMART eIF_5a_2 77 120 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Pte9g00415 120 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 2 119 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Pte9g00415 120 PIRSF Transl_init_eIF5A 1 56 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Pte9g00415 120 PIRSF Transl_init_eIF5A 71 120 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00415 Pte-Chr9 5016467 5017406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00415 2 120 Eukaryotic Initiation Factors Gene Family AT1G13950 63.025 9.23e-46 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00415 K03263 - pvy:116115236 154.451