Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00398 ATGAAACTGCATGGGTTGCAAAAATATTTACTTGTATTTCTTTGGTTGGCACAAGTTTTCCCTCTCCCTTCTTCAAATATTCACGGTCCTTCTTTTGTTCATGAGAATGTGGTTCACCATTTGGCAACCAATGAAGCAGAAGCTTTGCTGGTTTGGAGATCTAGCCTTGATAATCCAAAGGAGCGTTTGTCAAACTGGGGTGGGACTCATCCTTGCAATTGGAGTGGAATAAATTGTGATCACTCAAATAGTACCGTCAAACACATCAATCTTTCTGGTTATGCTCTCAGTGGTACTCTTCAAACTCTCAACTTTTCACATTTTCCCAATCTGACTTCTTTGAAAATTGCGCAAAATTCATTGTATGGGACCATTCCATCTCATATAAGCTACCTCTCACAACTTGCAATCTTCAATTTATCCGGGAACCATGTCGGTGGTTCCATTCCGAGAGAGGTATGTTCTTTGGAATCTCTAACTCAACTTGATTTTTCTGAAAACATATTTTCTGGTTCTATACCTTCTTGTATAGGAAGTTTGGAAAATCTTAGTATTCTATATCTTTCGAACAATAAGCTTTCTGCTCCTGTGCCTCGTGAGATCGGAATGTTGAGCTCTCTCATTGAGCTTGATTTATCTGTCAATAATCTTTCAGGTTCTATTCCGTCTTCAATTGGAAACTTACTAAATCTTCACATTCTATATCTTTATGAGAATAAATTTTCTGGACATGTTCCTTATGAAATCGAAATGTTGAGCTCTCTCATTGACCTTGATTTATCTATCAATCATCTTTCCGGTTCTATTCCTCCTTCTATTGGAAAATTGCGAAATCTTTGCTTTCTACATCTTCTCGAAAATGAACTTTCTGGTCATATACCTCAAGAAGTTGGAATGTTGAGTTCATTACAAGAGATTATGCTCTATAGAAATAATCTTTCGGGTTCCATTCCATCTTCAATTGGAAACTTACTAAATCTTCGCTTTCTATATCTTTATGAGAATAAATTTTCTGGTCCTATTCCTAATGAAATCGGAATGTTGAGCTCTCTCATTGAGCTTGATTTATCTACCAATCATCTTTCCAGTTCTATTCCACCTTCTATTTGGAGATTGCGAAATCTTCGCTTTCTAAATCTTTTCGAAAATGAAATTTCTGGTCATATACCTCAAGAAGTTGGAATGTTGAGCTCACTCCAAAATTGTTCTCTAAGTAAAAATAATTTTTCAGGTTCCATACCTTCTTCAATTGGAAATCTTACCCTACTCACTTATCTTAATTTGGGTGGAAATGAACTCGGAGGTGTGTTATCAAATGAAATGAATAATTTAAGCCAAATTGAAGAACTCGCTCTAGATGATAACCACTTCATCGGATACTTACCGCTAAAGCTATGTGACGCAAACAATCTGAAGCGCCTCACTGTTAGCAATAATAATTTCAAGGGTCCCATGCCAATCGGACTGAGAAATTGCAGTAGCTTAGTGAGATGCAGGCTTGACCATAATCATCTGCAAGGGAATCTATCGGAACAATTTGGTATATACCCTCATTTGAAATACATCGATATAAGTTACAACGATTTTCATGGTGAGCTTTCTTGGATGTGGGGGCAATCTAGGAACTTAGAAGCTTTGAAAATCTCTAACAACAATATATCTGGGAAGATACCTCCCGAGCTTGGATTTGCACAGAAATTGGAGTTCCTTGACTTGTCCTCAAATCATCTAACTGGAGAAATTCCTAAACAATTAGGAATGCTGAAGTCATTGTCTTATCTTTCACTTGAGAACAACCAACTTGTTGGAAAGGTTTCCAATGATTTGGAATTATTGTCAAGTCTTGGTCAACTCAAGCTTGCCTCCAACAGCTTGTCAGGTTTGATTCCGCCAATACAAAGTCAAAGTTTGTGGCTATTGAATTTGAGCTATAACAATTTTAGTGGACCTATTCCTGTGCAAATAGGAATGCTTCAATCTCTTCAAAATCTTGATCTTAGCTATAATTTTTTGACTGGCCAGATGCCAGAGCAAATTGGAGACCTACCCAACTTAGAAATGTTGAATATTTCCCACAATGAACTTTCTGGTGCTATTCCATCCAATTTCAAAAACATGAAAAGCTTGACCGATGTGAATGTGTCCTATAATGAACTTGAGGGTCCTATTCCAGTAAACCAAGCATTTGTCAATGCGCCATTTGAAGCTCTAAGAAATAACAAGGGTTTGTGTGGTAATCATACGGGACTTCAACTTTGCCCCTCGTCTTCTCACAGTAATAACCATGAGGGTCATAAGATAAAGAAAAGTCTAAAATTATTGCTCTCAATTCTTCTCCCCACTTTGTTCCTCATCATCATTTTGATTCTTGCACTTTGGTTTACTGGTTACCTAAGAAGGAGAAAGATTGCAAACGGCCCAAGGGAAACTCCGAATGGTCATAATCCATTTGCAATATGGAGCTACGATGGGCAAATGGTATACGAAAATGTAGTGGAAGCAACAAATGGATTCAATGAAGAGAACTGCATTGGAGTTGGAGGCTATGGACGAGTTTACAAGGCCACACTTGCCACAGGTCAAGTTGTTGCAATAAAAAAACTTCATTCGGAAGAAGATGGAAGTGCGGCAAGACTAAAAGCATTCACGAGAGAGATACGTGCTTTGACAGAAATACGCCATCGCAACATAGTAAAGCTTCATGGTTTCTGCTCACATCCAAGGCATTCCTTTCTAGTTTTTGAGTTCACAGAGGGCGGGAGCTTATTGAACATACTACATGATGAGGAAAAAGCAATTAGTTTTCATTGGATCAAGAGGGTCAATGTCCTTAGAGGTATCGCCAATGCTATCTCCTACATGCACCATGATTGCAGGCCTCCTATTGTTCACCGTGACATATCAAGCAAGAATATATTATTAGATTCAGAATATGAAGCTCACATTTCTGACTTTGGCAGTTCAAGACTCTTAGATCCAAGCTCATCTAATTGGACTTCATTTGCAGGAACTTACGGTTATTCTGCTCCAGAGCTAGCTTACACAATGGAGGCAAATGAGAAAAATGATGTGTACAGCTTTGGAGTAGTGGCACTGGAAATCATAATGGGGCAGCATCCAGGCGAGTTGGTCACTTCTCTTTCTTCACCATCTTCTTCGGTTTCTCGATCTACAATGGTTCATCCCATACCAGTTATAGATGTATTAGACCAACGTCTTTCTCATCCTACAACAAAAGTTGCAGAAGAAGTTATTTTGGGTGTAAAAGCGGCACTTGCTTGCTTAAATACCAATCCTCAATCTCGTCCAACCATGCTAGAAATATCTCAAATGCTATCTAGGAAACCACCATCTCTGCCAATGCCACTGCACATGATCTCACTTGTGGACTCATAG 3396 0.386 MKLHGLQKYLLVFLWLAQVFPLPSSNIHGPSFVHENVVHHLATNEAEALLVWRSSLDNPKERLSNWGGTHPCNWSGINCDHSNSTVKHINLSGYALSGTLQTLNFSHFPNLTSLKIAQNSLYGTIPSHISYLSQLAIFNLSGNHVGGSIPREVCSLESLTQLDFSENIFSGSIPSCIGSLENLSILYLSNNKLSAPVPREIGMLSSLIELDLSVNNLSGSIPSSIGNLLNLHILYLYENKFSGHVPYEIEMLSSLIDLDLSINHLSGSIPPSIGKLRNLCFLHLLENELSGHIPQEVGMLSSLQEIMLYRNNLSGSIPSSIGNLLNLRFLYLYENKFSGPIPNEIGMLSSLIELDLSTNHLSSSIPPSIWRLRNLRFLNLFENEISGHIPQEVGMLSSLQNCSLSKNNFSGSIPSSIGNLTLLTYLNLGGNELGGVLSNEMNNLSQIEELALDDNHFIGYLPLKLCDANNLKRLTVSNNNFKGPMPIGLRNCSSLVRCRLDHNHLQGNLSEQFGIYPHLKYIDISYNDFHGELSWMWGQSRNLEALKISNNNISGKIPPELGFAQKLEFLDLSSNHLTGEIPKQLGMLKSLSYLSLENNQLVGKVSNDLELLSSLGQLKLASNSLSGLIPPIQSQSLWLLNLSYNNFSGPIPVQIGMLQSLQNLDLSYNFLTGQMPEQIGDLPNLEMLNISHNELSGAIPSNFKNMKSLTDVNVSYNELEGPIPVNQAFVNAPFEALRNNKGLCGNHTGLQLCPSSSHSNNHEGHKIKKSLKLLLSILLPTLFLIIILILALWFTGYLRRRKIANGPRETPNGHNPFAIWSYDGQMVYENVVEATNGFNEENCIGVGGYGRVYKATLATGQVVAIKKLHSEEDGSAARLKAFTREIRALTEIRHRNIVKLHGFCSHPRHSFLVFEFTEGGSLLNILHDEEKAISFHWIKRVNVLRGIANAISYMHHDCRPPIVHRDISSKNILLDSEYEAHISDFGSSRLLDPSSSNWTSFAGTYGYSAPELAYTMEANEKNDVYSFGVVALEIIMGQHPGELVTSLSSPSSSVSRSTMVHPIPVIDVLDQRLSHPTTKVAEEVILGVKAALACLNTNPQSRPTMLEISQMLSRKPPSLPMPLHMISLVDS* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00398 1131 Gene3D Phosphorylase Kinase; domain 1 814 916 - -
Pte9g00398 1131 Pfam Leucine rich repeat N-terminal domain 44 80 IPR013210 -
Pte9g00398 1131 Gene3D Ribonuclease Inhibitor 468 756 IPR032675 -
Pte9g00398 1131 Pfam Leucine rich repeat 660 719 IPR001611 GO:0005515
Pte9g00398 1131 PRINTS Leucine-rich repeat signature 682 695 - -
Pte9g00398 1131 PRINTS Leucine-rich repeat signature 567 580 - -
Pte9g00398 1131 Pfam Protein kinase domain 839 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00398 1131 SUPERFAMILY Protein kinase-like (PK-like) 815 1112 IPR011009 -
Pte9g00398 1131 SUPERFAMILY L domain-like 490 746 - -
Pte9g00398 1131 SUPERFAMILY RNI-like 197 530 - -
Pte9g00398 1131 FunFam Leucine-rich repeat receptor protein kinase MSP1 801 916 - -
Pte9g00398 1131 SMART LRR_typ_2 658 681 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 132 156 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 348 372 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 420 444 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 204 228 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 588 612 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 180 203 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 682 705 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 300 324 IPR003591 -
Pte9g00398 1131 SMART LRR_typ_2 252 276 IPR003591 -
Pte9g00398 1131 FunFam Leucine-rich receptor-like protein kinase family protein 295 391 - -
Pte9g00398 1131 FunFam Nuclear pore complex protein NUP107 42 198 - -
Pte9g00398 1131 FunFam MDIS1-interacting receptor like kinase 2 917 1117 - -
Pte9g00398 1131 Gene3D Transferase(Phosphotransferase) domain 1 918 1118 - -
Pte9g00398 1131 FunFam Leucine-rich receptor-like protein kinase family protein 199 294 - -
Pte9g00398 1131 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Pte9g00398 1131 Gene3D Ribonuclease Inhibitor 199 299 IPR032675 -
Pte9g00398 1131 Gene3D Ribonuclease Inhibitor 42 198 IPR032675 -
Pte9g00398 1131 ProSiteProfiles Protein kinase domain profile. 838 1119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00398 1131 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 444 757 - -
Pte9g00398 1131 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 383 1113 - -
Pte9g00398 1131 SUPERFAMILY L domain-like 84 246 - -
Pte9g00398 1131 ProSitePatterns Tyrosine protein kinases specific active-site signature. 962 974 IPR008266 GO:0004672|GO:0006468
Pte9g00398 1131 Gene3D Ribonuclease Inhibitor 300 467 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00398 Pte-Chr9 4704495 4708248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00398 45 652 Receptor kinase-like Gene Family AT4G08850 33.438 3.23e-94 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte9g00398 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00398 - - csin:114305933 1082.01