Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00396 | ATGAAACTGCAAGGGTTGCAAAAATATTTATTTGTATTTCTTTGGTTGGCACAAGTTTTCCCTCTCCCTTCTTCAAATATTCACGGTCCTTCTTTTGTTCATGAGAATGTGGTTCACCATTTGGCAACCAATGAAGCAGAAGCTTTGCTGGTTTGGAGATCTAGCCTTCATAATCCAAAGGAGCGTTTGCCAAACTGGGTTGGAACTCATCCTTGCAATTGGACTGGAATATATTGTGATGAATCTAATAGTACCGTCAAACACATCAATCTTTCTGATTATGGTCTCAGTGGTACTCTTCAAACTCTCAACTTTTCACATTTTCCCAATTTGACTTCTTTGGAAATTGCGCAAAATTCATTTTATGGGACCATTCCATCTCATATAAGCTACCTCTCACAACTTGCAATCTTCAATTTATCCGGGAACCATGTGGGCGGTTCCATTCCGAGGGAGGTATGTTCTTTGGAATCTCTAACTCAACTTGATTTTTCTGAAAACATATTTTCTGGTTCTATACCTTCTTGTATAGGAAGTTTGGGAAATCTTCGCATTCTATGTCTTTCTGATAATAAATTTTCTGGTATTGTCCCTCATGAAATCGGAATGTTGAGCTCTCTCGATAAGCTTGATCTATCTACAAATAATCTTTCAGGTTCTATTCCACCTTCTATTGGGAGATTGCAAAATCTTAGCATTCTATATCTTGACGAAAATGAAATTTCTGGTCATATACCTCAAGAAGTTGGAATGTTGAGTTCACTACAAGAGATTGGGCTCTATAAAAATTATCTTTTTGGTTCTATTCCATCTTCAATTGGAAACTTACTAAATCTTCGCATTCTATCTCTTTACGGCAATTATCTTTCTGGTCCTGTCCCTCATGAAATCGGAATGTTGAGCTCTCTCATTAGACTTTGGATCTCTACAAATTATCTTTCAGGTTTCATTCCACCTTCAATTGGAAACTTACGAAATCTTCGCTTTCTACTTCTTCATGATAATAAATTTTCTGGTTATATCCCTCAAGAAGTTGGAATGCTGACCTCACTCCAAAACTTTTCTCTACATACAAATAATCTTTCAGGTCTCATTCCATATTCGATTGGAAACTTACTAAATCTTCGCATTCTATATCTTTATGATAATAAATTATCTGGTCCTATTCCTTATGAAATTGGAATGTTGAGTTCACTGCAAGTGATTGCGCTTCAGAGAAATAATCTTTCTGGTTCTATTCCACCTTCTATTGGGAGATTGCGAAATCTTCGCATTCTACAGCTTGGAGAAAATGAAATTTCTGGTCATATCCCTCGAGAAATTGGAATGTTGAGTTTCCTTGAAAAGCTTGGTCTGGCGGTGAATAACCTCAGTGGAACGGTTCCAAGAAGTTTTGGAAACCTTACTCTACTCACATGGCTTAATCTAGGTGAAAATGAACTCGAAGGCGTGTTACCAAAGGAAATGAATAATTTAAACCTTACTCTACTCGGTCTAGCTGTTAACCACTTCATCGGATACTTACCGCTAAAGCTCTGTGACGGAAACAATTTGAAATACCTCACTGTGAGTAATAACAATTTCATGGGTCCCATGCCAATCGGACTGAGAAATTGCAGTAGCTTAGTGAGATTCAGGCTTGAGCATAATTATCTGCAAGGGAATACATCAGAACAATTTGGTATATACCCTCATTTGAAATACATTGATATAAGTTACAACGATTTTCATGGTGAGCTTTCTTGGATGTGGGGGCAATCTAGGAACTTAGAAGCTTTGAAAATCTCCAACAATAATATATCTGGGAAGATACCTCCTGAGCTTGGATTTGCACAGAAATTGGAGTTCCTTGACTTGTCCTCAAATCATCTAACTGGAGAAATTCCCAAGCAACTAGGAATGCTGAAGTCGTTGTCTTATCTTTCACTTGAGAACAACCAACTTGTTGGAAAGGTTTCGAATGATTTGGTAGTACTGTCAAGTCTTGAACAACTCAAGCTTGCCTCCAACAGCTTTTCAGGTTTGATTCCGCCAGTACAAAGTCAAAGATTGTGGCTATTGAATTTGAGCTATAACAATTTTAGTGGACCTATTCCTGTGCAAATAGGAATGCTGAAATCTCTTCAAAATCTTGATCTTAGCTATAATTTTTTGACTGGCCAGATGCCACAGCAAATTGGAGACCTTTCCAACTTAGAAATTTTGAATATTTCCCACAATGAACTTTCTGGTGCTATTCCATCCAATTTCAAAAACATGAAAAGCTTGACCGATGTCAATGTATCCTATAATGAACTTGAGGGTCCTATTCCAGTAAACCAAGCATTTGTCAATGCGCCATTTGAAGCTCTAAGAAATAACAAGGGTTTGTGTGGTAATCATACAGGACTTCAACTTTGCCCCTCGTCTTCTCACAGTAATAACCATGAGGGTCATAAGATAAAGAAAAGTTTAAAATTATTGCTCTCAATTCTTCTCCCCACTTTGTTCCTCATCATCATTTTGATTCTTGCACTTTGGTTTACTGGTTACCTAAGAAGGAGAAAGGTTGCAAACTGCCCAAGGGAAACTCCAAATGGTCATAATCCATTTGCAATATGGAGCTATGATGGGCAAATGGTATACGAAAATGTAGTGGAAGCAACAAATGGATTCAATGAAGAGAACTGCATTGGAGTTGGAGGCTACGGAGGTGTTTACAAGGCCACACTTGCCACAGGTCAAGTTGTTGCAATAAAAAAACTTCATTCGGAAGAAGATGGCAGTGCGGCAAGACTAAAAGCATTCACAAGAGAGATACGTTCTTTGGCAGAAATACGCCATCGCAACATAGTAAGGCTTCATGGTTTCTGCTCACATCCAAGGCATTCCTTTCTCGTTTATGAGTTCATAGAGGGAGGGAGCTTATTGAACATACTACATGATGAGGAACAAGCAATTAGATTTCATTGGATCAAGAGGGTCAATGTCATTAGAGGTATCGCCAATGCTATCTCCTATATGCATCATGATTGCAGACCTCCTATTGTTCACCGTGACATATCAAGCAAGAATATATTGTTGGATTCAGAATATGAAGCTCACATTTCTGACTTTGGCAGTTCAAGACTCTTAGATCCAAACTCATCTAATTGGACTTCATTTGCAGGAACTTATGGTTATTCTGCTCCAGAGCTAGCTTACACAATGGAGGCAAATGAGAAAAATGATGTGTATAGCTTTGGAGTAGTGGCACTAGAAATCATAATGGGGCAGCATCCAGGCGAGTTCGTCACTTCTCTATCTTCACCGTCTTCTTTGGCTTCTCAATCTGGAATGGTTCATCCCATGCCTTTTATAGAGGTATTAGACCAGCGTCTTTCTCATCCTACAACAATAGTTGCAGAAGAAGTTATTTTGGGTGTAAAAACGGCACTTGCCTGCTTAAATACCAATCCTCAATCTCGTCCAACCATGCAAGAAATATCTCAAATGCTATCTAGGGAAGCACCATCTCCTTATTACTAA | 3507 | 0.3847 | MKLQGLQKYLFVFLWLAQVFPLPSSNIHGPSFVHENVVHHLATNEAEALLVWRSSLHNPKERLPNWVGTHPCNWTGIYCDESNSTVKHINLSDYGLSGTLQTLNFSHFPNLTSLEIAQNSFYGTIPSHISYLSQLAIFNLSGNHVGGSIPREVCSLESLTQLDFSENIFSGSIPSCIGSLGNLRILCLSDNKFSGIVPHEIGMLSSLDKLDLSTNNLSGSIPPSIGRLQNLSILYLDENEISGHIPQEVGMLSSLQEIGLYKNYLFGSIPSSIGNLLNLRILSLYGNYLSGPVPHEIGMLSSLIRLWISTNYLSGFIPPSIGNLRNLRFLLLHDNKFSGYIPQEVGMLTSLQNFSLHTNNLSGLIPYSIGNLLNLRILYLYDNKLSGPIPYEIGMLSSLQVIALQRNNLSGSIPPSIGRLRNLRILQLGENEISGHIPREIGMLSFLEKLGLAVNNLSGTVPRSFGNLTLLTWLNLGENELEGVLPKEMNNLNLTLLGLAVNHFIGYLPLKLCDGNNLKYLTVSNNNFMGPMPIGLRNCSSLVRFRLEHNYLQGNTSEQFGIYPHLKYIDISYNDFHGELSWMWGQSRNLEALKISNNNISGKIPPELGFAQKLEFLDLSSNHLTGEIPKQLGMLKSLSYLSLENNQLVGKVSNDLVVLSSLEQLKLASNSFSGLIPPVQSQRLWLLNLSYNNFSGPIPVQIGMLKSLQNLDLSYNFLTGQMPQQIGDLSNLEILNISHNELSGAIPSNFKNMKSLTDVNVSYNELEGPIPVNQAFVNAPFEALRNNKGLCGNHTGLQLCPSSSHSNNHEGHKIKKSLKLLLSILLPTLFLIIILILALWFTGYLRRRKVANCPRETPNGHNPFAIWSYDGQMVYENVVEATNGFNEENCIGVGGYGGVYKATLATGQVVAIKKLHSEEDGSAARLKAFTREIRSLAEIRHRNIVRLHGFCSHPRHSFLVYEFIEGGSLLNILHDEEQAIRFHWIKRVNVIRGIANAISYMHHDCRPPIVHRDISSKNILLDSEYEAHISDFGSSRLLDPNSSNWTSFAGTYGYSAPELAYTMEANEKNDVYSFGVVALEIIMGQHPGEFVTSLSSPSSLASQSGMVHPMPFIEVLDQRLSHPTTIVAEEVILGVKTALACLNTNPQSRPTMQEISQMLSREAPSPYY* | 1169 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00396 | 1168 | Gene3D | Phosphorylase Kinase; domain 1 | 861 | 963 | - | - | |
Pte9g00396 | 1168 | Gene3D | Ribonuclease Inhibitor | 489 | 809 | IPR032675 | - | |
Pte9g00396 | 1168 | Gene3D | Ribonuclease Inhibitor | 248 | 488 | IPR032675 | - | |
Pte9g00396 | 1168 | Gene3D | Ribonuclease Inhibitor | 193 | 247 | IPR032675 | - | |
Pte9g00396 | 1168 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 1009 | 1021 | IPR008266 | GO:0004672|GO:0006468 | |
Pte9g00396 | 1168 | SUPERFAMILY | L domain-like | 538 | 793 | - | - | |
Pte9g00396 | 1168 | Pfam | Protein kinase domain | 886 | 1157 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte9g00396 | 1168 | FunFam | Leucine-rich receptor-like protein kinase family protein | 295 | 390 | - | - | |
Pte9g00396 | 1168 | SUPERFAMILY | L domain-like | 68 | 293 | - | - | |
Pte9g00396 | 1168 | PRINTS | Leucine-rich repeat signature | 729 | 742 | - | - | |
Pte9g00396 | 1168 | PRINTS | Leucine-rich repeat signature | 614 | 627 | - | - | |
Pte9g00396 | 1168 | FunFam | Leucine-rich receptor-like protein kinase family protein | 391 | 487 | - | - | |
Pte9g00396 | 1168 | Pfam | Leucine rich repeat N-terminal domain | 44 | 80 | IPR013210 | - | |
Pte9g00396 | 1168 | SUPERFAMILY | Protein kinase-like (PK-like) | 862 | 1159 | IPR011009 | - | |
Pte9g00396 | 1168 | Gene3D | Ribonuclease Inhibitor | 42 | 192 | IPR032675 | - | |
Pte9g00396 | 1168 | FunFam | Nuclear pore complex protein NUP107 | 42 | 187 | - | - | |
Pte9g00396 | 1168 | ProSiteProfiles | Protein kinase domain profile. | 885 | 1168 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte9g00396 | 1168 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 491 | 804 | - | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 132 | 156 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 252 | 276 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 204 | 228 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 348 | 371 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 705 | 728 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 468 | 492 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 180 | 203 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 396 | 420 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 635 | 659 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 300 | 324 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 729 | 752 | IPR003591 | - | |
Pte9g00396 | 1168 | SMART | LRR_typ_2 | 444 | 467 | IPR003591 | - | |
Pte9g00396 | 1168 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 848 | 963 | - | - | |
Pte9g00396 | 1168 | FunFam | Predicted protein | 196 | 294 | - | - | |
Pte9g00396 | 1168 | SUPERFAMILY | RNI-like | 244 | 577 | - | - | |
Pte9g00396 | 1168 | ProSitePatterns | Protein kinases ATP-binding region signature. | 891 | 914 | IPR017441 | GO:0005524 | |
Pte9g00396 | 1168 | Pfam | Leucine rich repeat | 707 | 766 | IPR001611 | GO:0005515 | |
Pte9g00396 | 1168 | FunFam | MDIS1-interacting receptor like kinase 2 | 964 | 1165 | - | - | |
Pte9g00396 | 1168 | Gene3D | Transferase(Phosphotransferase) domain 1 | 964 | 1165 | - | - | |
Pte9g00396 | 1168 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 417 | 1162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00396 | Pte-Chr9 | 4613849 | 4617937 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00396 | 45 | 652 | Receptor kinase-like Gene Family | AT4G08850 | 34.585 | 1.29e-97 | 332 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Pte9g00396 | Pkinase | 1.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00396 | - | - | csin:114256602 | 1103.97 |