Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00396 ATGAAACTGCAAGGGTTGCAAAAATATTTATTTGTATTTCTTTGGTTGGCACAAGTTTTCCCTCTCCCTTCTTCAAATATTCACGGTCCTTCTTTTGTTCATGAGAATGTGGTTCACCATTTGGCAACCAATGAAGCAGAAGCTTTGCTGGTTTGGAGATCTAGCCTTCATAATCCAAAGGAGCGTTTGCCAAACTGGGTTGGAACTCATCCTTGCAATTGGACTGGAATATATTGTGATGAATCTAATAGTACCGTCAAACACATCAATCTTTCTGATTATGGTCTCAGTGGTACTCTTCAAACTCTCAACTTTTCACATTTTCCCAATTTGACTTCTTTGGAAATTGCGCAAAATTCATTTTATGGGACCATTCCATCTCATATAAGCTACCTCTCACAACTTGCAATCTTCAATTTATCCGGGAACCATGTGGGCGGTTCCATTCCGAGGGAGGTATGTTCTTTGGAATCTCTAACTCAACTTGATTTTTCTGAAAACATATTTTCTGGTTCTATACCTTCTTGTATAGGAAGTTTGGGAAATCTTCGCATTCTATGTCTTTCTGATAATAAATTTTCTGGTATTGTCCCTCATGAAATCGGAATGTTGAGCTCTCTCGATAAGCTTGATCTATCTACAAATAATCTTTCAGGTTCTATTCCACCTTCTATTGGGAGATTGCAAAATCTTAGCATTCTATATCTTGACGAAAATGAAATTTCTGGTCATATACCTCAAGAAGTTGGAATGTTGAGTTCACTACAAGAGATTGGGCTCTATAAAAATTATCTTTTTGGTTCTATTCCATCTTCAATTGGAAACTTACTAAATCTTCGCATTCTATCTCTTTACGGCAATTATCTTTCTGGTCCTGTCCCTCATGAAATCGGAATGTTGAGCTCTCTCATTAGACTTTGGATCTCTACAAATTATCTTTCAGGTTTCATTCCACCTTCAATTGGAAACTTACGAAATCTTCGCTTTCTACTTCTTCATGATAATAAATTTTCTGGTTATATCCCTCAAGAAGTTGGAATGCTGACCTCACTCCAAAACTTTTCTCTACATACAAATAATCTTTCAGGTCTCATTCCATATTCGATTGGAAACTTACTAAATCTTCGCATTCTATATCTTTATGATAATAAATTATCTGGTCCTATTCCTTATGAAATTGGAATGTTGAGTTCACTGCAAGTGATTGCGCTTCAGAGAAATAATCTTTCTGGTTCTATTCCACCTTCTATTGGGAGATTGCGAAATCTTCGCATTCTACAGCTTGGAGAAAATGAAATTTCTGGTCATATCCCTCGAGAAATTGGAATGTTGAGTTTCCTTGAAAAGCTTGGTCTGGCGGTGAATAACCTCAGTGGAACGGTTCCAAGAAGTTTTGGAAACCTTACTCTACTCACATGGCTTAATCTAGGTGAAAATGAACTCGAAGGCGTGTTACCAAAGGAAATGAATAATTTAAACCTTACTCTACTCGGTCTAGCTGTTAACCACTTCATCGGATACTTACCGCTAAAGCTCTGTGACGGAAACAATTTGAAATACCTCACTGTGAGTAATAACAATTTCATGGGTCCCATGCCAATCGGACTGAGAAATTGCAGTAGCTTAGTGAGATTCAGGCTTGAGCATAATTATCTGCAAGGGAATACATCAGAACAATTTGGTATATACCCTCATTTGAAATACATTGATATAAGTTACAACGATTTTCATGGTGAGCTTTCTTGGATGTGGGGGCAATCTAGGAACTTAGAAGCTTTGAAAATCTCCAACAATAATATATCTGGGAAGATACCTCCTGAGCTTGGATTTGCACAGAAATTGGAGTTCCTTGACTTGTCCTCAAATCATCTAACTGGAGAAATTCCCAAGCAACTAGGAATGCTGAAGTCGTTGTCTTATCTTTCACTTGAGAACAACCAACTTGTTGGAAAGGTTTCGAATGATTTGGTAGTACTGTCAAGTCTTGAACAACTCAAGCTTGCCTCCAACAGCTTTTCAGGTTTGATTCCGCCAGTACAAAGTCAAAGATTGTGGCTATTGAATTTGAGCTATAACAATTTTAGTGGACCTATTCCTGTGCAAATAGGAATGCTGAAATCTCTTCAAAATCTTGATCTTAGCTATAATTTTTTGACTGGCCAGATGCCACAGCAAATTGGAGACCTTTCCAACTTAGAAATTTTGAATATTTCCCACAATGAACTTTCTGGTGCTATTCCATCCAATTTCAAAAACATGAAAAGCTTGACCGATGTCAATGTATCCTATAATGAACTTGAGGGTCCTATTCCAGTAAACCAAGCATTTGTCAATGCGCCATTTGAAGCTCTAAGAAATAACAAGGGTTTGTGTGGTAATCATACAGGACTTCAACTTTGCCCCTCGTCTTCTCACAGTAATAACCATGAGGGTCATAAGATAAAGAAAAGTTTAAAATTATTGCTCTCAATTCTTCTCCCCACTTTGTTCCTCATCATCATTTTGATTCTTGCACTTTGGTTTACTGGTTACCTAAGAAGGAGAAAGGTTGCAAACTGCCCAAGGGAAACTCCAAATGGTCATAATCCATTTGCAATATGGAGCTATGATGGGCAAATGGTATACGAAAATGTAGTGGAAGCAACAAATGGATTCAATGAAGAGAACTGCATTGGAGTTGGAGGCTACGGAGGTGTTTACAAGGCCACACTTGCCACAGGTCAAGTTGTTGCAATAAAAAAACTTCATTCGGAAGAAGATGGCAGTGCGGCAAGACTAAAAGCATTCACAAGAGAGATACGTTCTTTGGCAGAAATACGCCATCGCAACATAGTAAGGCTTCATGGTTTCTGCTCACATCCAAGGCATTCCTTTCTCGTTTATGAGTTCATAGAGGGAGGGAGCTTATTGAACATACTACATGATGAGGAACAAGCAATTAGATTTCATTGGATCAAGAGGGTCAATGTCATTAGAGGTATCGCCAATGCTATCTCCTATATGCATCATGATTGCAGACCTCCTATTGTTCACCGTGACATATCAAGCAAGAATATATTGTTGGATTCAGAATATGAAGCTCACATTTCTGACTTTGGCAGTTCAAGACTCTTAGATCCAAACTCATCTAATTGGACTTCATTTGCAGGAACTTATGGTTATTCTGCTCCAGAGCTAGCTTACACAATGGAGGCAAATGAGAAAAATGATGTGTATAGCTTTGGAGTAGTGGCACTAGAAATCATAATGGGGCAGCATCCAGGCGAGTTCGTCACTTCTCTATCTTCACCGTCTTCTTTGGCTTCTCAATCTGGAATGGTTCATCCCATGCCTTTTATAGAGGTATTAGACCAGCGTCTTTCTCATCCTACAACAATAGTTGCAGAAGAAGTTATTTTGGGTGTAAAAACGGCACTTGCCTGCTTAAATACCAATCCTCAATCTCGTCCAACCATGCAAGAAATATCTCAAATGCTATCTAGGGAAGCACCATCTCCTTATTACTAA 3507 0.3847 MKLQGLQKYLFVFLWLAQVFPLPSSNIHGPSFVHENVVHHLATNEAEALLVWRSSLHNPKERLPNWVGTHPCNWTGIYCDESNSTVKHINLSDYGLSGTLQTLNFSHFPNLTSLEIAQNSFYGTIPSHISYLSQLAIFNLSGNHVGGSIPREVCSLESLTQLDFSENIFSGSIPSCIGSLGNLRILCLSDNKFSGIVPHEIGMLSSLDKLDLSTNNLSGSIPPSIGRLQNLSILYLDENEISGHIPQEVGMLSSLQEIGLYKNYLFGSIPSSIGNLLNLRILSLYGNYLSGPVPHEIGMLSSLIRLWISTNYLSGFIPPSIGNLRNLRFLLLHDNKFSGYIPQEVGMLTSLQNFSLHTNNLSGLIPYSIGNLLNLRILYLYDNKLSGPIPYEIGMLSSLQVIALQRNNLSGSIPPSIGRLRNLRILQLGENEISGHIPREIGMLSFLEKLGLAVNNLSGTVPRSFGNLTLLTWLNLGENELEGVLPKEMNNLNLTLLGLAVNHFIGYLPLKLCDGNNLKYLTVSNNNFMGPMPIGLRNCSSLVRFRLEHNYLQGNTSEQFGIYPHLKYIDISYNDFHGELSWMWGQSRNLEALKISNNNISGKIPPELGFAQKLEFLDLSSNHLTGEIPKQLGMLKSLSYLSLENNQLVGKVSNDLVVLSSLEQLKLASNSFSGLIPPVQSQRLWLLNLSYNNFSGPIPVQIGMLKSLQNLDLSYNFLTGQMPQQIGDLSNLEILNISHNELSGAIPSNFKNMKSLTDVNVSYNELEGPIPVNQAFVNAPFEALRNNKGLCGNHTGLQLCPSSSHSNNHEGHKIKKSLKLLLSILLPTLFLIIILILALWFTGYLRRRKVANCPRETPNGHNPFAIWSYDGQMVYENVVEATNGFNEENCIGVGGYGGVYKATLATGQVVAIKKLHSEEDGSAARLKAFTREIRSLAEIRHRNIVRLHGFCSHPRHSFLVYEFIEGGSLLNILHDEEQAIRFHWIKRVNVIRGIANAISYMHHDCRPPIVHRDISSKNILLDSEYEAHISDFGSSRLLDPNSSNWTSFAGTYGYSAPELAYTMEANEKNDVYSFGVVALEIIMGQHPGEFVTSLSSPSSLASQSGMVHPMPFIEVLDQRLSHPTTIVAEEVILGVKTALACLNTNPQSRPTMQEISQMLSREAPSPYY* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00396 1168 Gene3D Phosphorylase Kinase; domain 1 861 963 - -
Pte9g00396 1168 Gene3D Ribonuclease Inhibitor 489 809 IPR032675 -
Pte9g00396 1168 Gene3D Ribonuclease Inhibitor 248 488 IPR032675 -
Pte9g00396 1168 Gene3D Ribonuclease Inhibitor 193 247 IPR032675 -
Pte9g00396 1168 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1009 1021 IPR008266 GO:0004672|GO:0006468
Pte9g00396 1168 SUPERFAMILY L domain-like 538 793 - -
Pte9g00396 1168 Pfam Protein kinase domain 886 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00396 1168 FunFam Leucine-rich receptor-like protein kinase family protein 295 390 - -
Pte9g00396 1168 SUPERFAMILY L domain-like 68 293 - -
Pte9g00396 1168 PRINTS Leucine-rich repeat signature 729 742 - -
Pte9g00396 1168 PRINTS Leucine-rich repeat signature 614 627 - -
Pte9g00396 1168 FunFam Leucine-rich receptor-like protein kinase family protein 391 487 - -
Pte9g00396 1168 Pfam Leucine rich repeat N-terminal domain 44 80 IPR013210 -
Pte9g00396 1168 SUPERFAMILY Protein kinase-like (PK-like) 862 1159 IPR011009 -
Pte9g00396 1168 Gene3D Ribonuclease Inhibitor 42 192 IPR032675 -
Pte9g00396 1168 FunFam Nuclear pore complex protein NUP107 42 187 - -
Pte9g00396 1168 ProSiteProfiles Protein kinase domain profile. 885 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00396 1168 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 491 804 - -
Pte9g00396 1168 SMART LRR_typ_2 132 156 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 252 276 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 204 228 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 348 371 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 705 728 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 468 492 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 180 203 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 396 420 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 635 659 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 300 324 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 729 752 IPR003591 -
Pte9g00396 1168 SMART LRR_typ_2 444 467 IPR003591 -
Pte9g00396 1168 FunFam Leucine-rich repeat receptor protein kinase MSP1 848 963 - -
Pte9g00396 1168 FunFam Predicted protein 196 294 - -
Pte9g00396 1168 SUPERFAMILY RNI-like 244 577 - -
Pte9g00396 1168 ProSitePatterns Protein kinases ATP-binding region signature. 891 914 IPR017441 GO:0005524
Pte9g00396 1168 Pfam Leucine rich repeat 707 766 IPR001611 GO:0005515
Pte9g00396 1168 FunFam MDIS1-interacting receptor like kinase 2 964 1165 - -
Pte9g00396 1168 Gene3D Transferase(Phosphotransferase) domain 1 964 1165 - -
Pte9g00396 1168 PANTHER LEUCINE RICH REPEAT KINASE 2 417 1162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00396 Pte-Chr9 4613849 4617937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00396 45 652 Receptor kinase-like Gene Family AT4G08850 34.585 1.29e-97 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte9g00396 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00396 - - csin:114256602 1103.97