Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00390 ATGGCAGAAGATGACTGGGATCTTTATGCTGTGGTTCGTGGTAGTAAATCTGCAACAACTACAGCCACTGGTTTAAGTTTTAATACATCAAACACAACCACCCAGAACTTTTTGTCATGCTTGTCAAAATTGACTTTTGATGAAGATGATACTGCACCTTTCACTTTTCCCAGTGTAGTGCAGCCCGTCACCACTGGTTTTCATGAGCTGCAACAAGCTTGCATGCCATTTATGGGTTGCGGCACCACCACCACGAAAGCCAACACCAACAGTGTTTGTGGGGTTGACATCAGTATTAGTGCTTCTTCTGTCTCTGACCTTGGATCCATTGGCAGACACCAACAACCATTTCAGTTTGGGGGTCCTCCTCTCAAGCCTAAAATATTTCATGACCAGTATCATCAACAACAGCAACAACCACATCAGTTTCAAATAGCTCAGAACAACATCGGTTCTTGTGCTGCGACTTTGTCAAACACTTCATCTCAGCCAACCAAATCAAGAAAAAGGAAAAGCCAGCAGAAGAGGTTAGTGTGTCATGTACCATCTGACAAGCTTTCTTCCGATTTATGGGCATGGCGTAAGTATGGACAAAAACCCATCAAGGGTTCACCATATCCCAGAAACTACTACAGATGCAGTAGCTCAAAGGGTTGTGCAGCGAGGAAGCAAGTGGAACGAAGCACCAAGGACCCAGAACTGTTTATTGTGACATACACAGGTGAGCATACCCATCCGAGGCCAACACACCGAAACTCACTCGCTGGTAGTACCCGACCCAGGTTATCATCTGCATCCCAGAAACTCGATTCCCAATCTTTCCAGTTAGCTGGCTCCAACACAGTGATGAACAACAACACAAACCCGTCTTCTTCATCACCCATGTCAGAATCACCGACAACCCCAGGTACCAGTTCCCCACCCGAGGATGAAACCCAGAGCAGAGATATGGAAATTGAAGCTGCTGCTGCAGAAAATCATGTCCTCGACGATGTTGATGATTTCGCCGATGTTGATGATCATGATTTCTGA 1032 0.4583 MAEDDWDLYAVVRGSKSATTTATGLSFNTSNTTTQNFLSCLSKLTFDEDDTAPFTFPSVVQPVTTGFHELQQACMPFMGCGTTTTKANTNSVCGVDISISASSVSDLGSIGRHQQPFQFGGPPLKPKIFHDQYHQQQQQPHQFQIAQNNIGSCAATLSNTSSQPTKSRKRKSQQKRLVCHVPSDKLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCAARKQVERSTKDPELFIVTYTGEHTHPRPTHRNSLAGSTRPRLSSASQKLDSQSFQLAGSNTVMNNNTNPSSSSPMSESPTTPGTSSPPEDETQSRDMEIEAAAAENHVLDDVDDFADVDDHDF* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00390 343 MobiDBLite consensus disorder prediction 239 343 - -
Pte9g00390 343 SUPERFAMILY WRKY DNA-binding domain 184 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g00390 343 MobiDBLite consensus disorder prediction 311 331 - -
Pte9g00390 343 SMART WRKY_cls 187 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g00390 343 MobiDBLite consensus disorder prediction 155 179 - -
Pte9g00390 343 ProSiteProfiles WRKY domain profile. 182 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g00390 343 Pfam WRKY DNA -binding domain 189 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte9g00390 343 FunFam WRKY transcription factor 22 170 241 - -
Pte9g00390 343 Gene3D WRKY domain 170 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte9g00390 343 MobiDBLite consensus disorder prediction 250 310 - -
Pte9g00390 343 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 341 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00390 Pte-Chr9 4518617 4519956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00390 166 259 WRKY Transcription Factor Family AT5G52830 86.170 7.37e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte9g00390 WRKY 1.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00390 - - qsa:O6P43_008144 257.299