Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00383 | ATGGTTTCCAACAACCCGAACCCGCCTGAAGGGTTTTACTTGGATCCAACAGGAATGGCGGTACCTGTACTTGGGTCCTTTGCTTCAGTCACCACCGCTGCAACTGCGGCTGCTACCCCGGAGGCCACCAATTCTATGGAAGATCCCGGAAAGAAGATAAGAAAGCCTTATACAATAACCAAGTCCAGGGAGAGCTGGTCTGACCCTGAGCACGACAAGTTTCTTGAAGCCCTTCAACTGTTTGATCGTGACTGGAAAAAAATTGAAGCATTTATCGGATCAAAGACAGTTATACAGATACGCAGCCATGCACAGAAGTACTTTCTAAAAGTTCAGAAGAATGGAACAAATGAGCATCTGCCTCCCCCAAGGCCGAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTCCAAAAGCTGCTCAAGTACAGTCTTCTGGATCTTCATGTGCATTGCTTGAGCCTGTAGACACGGCGCAGCCTGGTTCCAAAAATATGCTTAAAAGCCATCTAGGTAATACAGCTTTGTCTTCTTGGACAAGCAACGATGTTCAGGGAAACAGTTTATTCCATGGAGCAAAAGGGCCAGCAACGAATAAAAGTTGCAGTAGCACTGAAAGCACTCCGAGAACATGCCAGGTTAGAGAGGCTATTGGCCAAGGGGATCATAATCAGACATCAAAAGTTCTACCTGATTTTGCTCAAGTATATGGCTTCATTGGTAATGTCTTTGACCCAAATAGTACTGGACATATACACAAACTGATGAAGATGGACCCGATAGATGTTGAGACGGTGCTACTATTGATGAGAAATTTGTCTATCAATTTAACCAGCCCAGAATTTGAGAATCATAGAAAGCTGCTTTCCAACTATGATGTGGAGCTTGAGAATAGTGCCAATGCAAACAGGGAGGAGTAA | 921 | 0.4452 | MVSNNPNPPEGFYLDPTGMAVPVLGSFASVTTAATAAATPEATNSMEDPGKKIRKPYTITKSRESWSDPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTNEHLPPPRPKRKAAHPYPQKAPKAAQVQSSGSSCALLEPVDTAQPGSKNMLKSHLGNTALSSWTSNDVQGNSLFHGAKGPATNKSCSSTESTPRTCQVREAIGQGDHNQTSKVLPDFAQVYGFIGNVFDPNSTGHIHKLMKMDPIDVETVLLLMRNLSINLTSPEFENHRKLLSNYDVELENSANANREE* | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00383 | 306 | ProSiteProfiles | SANT domain profile. | 61 | 114 | IPR017884 | - | |
Pte9g00383 | 306 | CDD | SANT | 65 | 108 | IPR001005 | - | |
Pte9g00383 | 306 | Gene3D | - | 66 | 113 | - | - | |
Pte9g00383 | 306 | PANTHER | SWI/SNF COMPLEX-RELATED | 30 | 284 | - | - | |
Pte9g00383 | 306 | MobiDBLite | consensus disorder prediction | 112 | 140 | - | - | |
Pte9g00383 | 306 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 61 | 110 | IPR006447 | GO:0003677 | |
Pte9g00383 | 306 | Pfam | Myb-like DNA-binding domain | 63 | 108 | IPR001005 | - | |
Pte9g00383 | 306 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 58 | 112 | IPR017930 | - | |
Pte9g00383 | 306 | SMART | sant | 62 | 110 | IPR001005 | - | |
Pte9g00383 | 306 | SUPERFAMILY | Homeodomain-like | 57 | 113 | IPR009057 | - | |
Pte9g00383 | 306 | FunFam | protein REVEILLE 6 isoform X1 | 65 | 113 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00383 | Pte-Chr9 | 4395032 | 4401267 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pte9g00383 | Myb_DNA-binding | 7.9e-09 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00383 | - | - | qsa:O6P43_004257 | 415.231 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte16g00323 | 16 | 4302367 | 4307200 | Pte9g00383 | 9 | 4395032 | 4401267 | RCT | |
Pte9g00383 | 9 | 4395032 | 4401267 | Pte9g00383 | 9 | 4395032 | 4401267 | RCT |