Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00381 ATGATTATCCCTGAGAAGAATCGCAAGGAGATCTGCAAATACCTCTTTCGAGAGGGAGTTTGCTTCGCCAAGAAAGATTACAATTTGGCGAAACACCCTGAGATCGACGTTCCAAATCTGCAGGTGATTAAGCTTATGCAAAGCTTTAAATCAAGGGAATATGTTCGTGAGACCTTTGCATGGATGCACTACTATTGGTACTTGACAAACAGTGGAATTGATTTCTTGAGGACCTACCTCAATCTCCCTTCTGAAATCGTCCCTGCAACCTTGAAGAAATCAGCCAAGGCACCCGGCAGGCCATTTGGTGGACCTCCTGGTGATCGTCCACGTGGTCCACCTCGATTTGAAGGTGGTTCCAGATTTGGTGATCGTGATGGATACCGTGGTGGAGGTCCTCGTGGACCTCCTGGTGATTTTGGTGGTGAAAAGGGAGGAGCTCCTGCTGACTTCCAGCCATCATTTCGGCAAGGACCAACTAGGCCTGCATTTGGTCGCGGTGGAGGTGGTAGTTACGGTGCACCACCAAGTTCGAGCTTCTCTTGA 546 0.4908 MIIPEKNRKEICKYLFREGVCFAKKDYNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWYLTNSGIDFLRTYLNLPSEIVPATLKKSAKAPGRPFGGPPGDRPRGPPRFEGGSRFGDRDGYRGGGPRGPPGDFGGEKGGAPADFQPSFRQGPTRPAFGRGGGGSYGAPPSSSFS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00381 181 Gene3D - 1 104 IPR036388 -
Pte9g00381 181 MobiDBLite consensus disorder prediction 93 181 - -
Pte9g00381 181 MobiDBLite consensus disorder prediction 114 128 - -
Pte9g00381 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
Pte9g00381 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Pte9g00381 181 FunFam 40S ribosomal protein S10 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00381 Pte-Chr9 4383688 4386272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00381 1 156 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 81.646 6.70e-75 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00381 K02947 - qsa:O6P43_004259 234.572