Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00380 ATGTCCACCAAACACTCACCAAATTTGAGCCAGAAGTTCTTTGGTGTCCAATTATGGCTTCTTCTGGTGATTTTCATTTCACTATTCATTTTCATGATCTTTTTTATTCTCTGCGTCTACTTCATTTGCTATCGTCATAGGAAGTGCTACAAAACTAGTGTGTGTATATCCAAACCTATTGCCTGCAAGCAAAGCCAGAATGCTTTGAGCACATCTTCCCTTGATAGGAGACTACTTTCAGGCAGTATTTCTGAAATTGAGTTGAACATGAATAATGGAAAGTTTTCAGGTAACCAACCATCTTGGTTTGGTGGGCAGTGCTTTGGTACAATCACTGAAAACAGCACATTGACGAATGTTGGATCAGTTGTTAAGCAGTCTCCAGTTCTCAAAGATGGATGGAGGGGCAACAGGATTAGCTTCAAAGAAATCGAGATTGCAACAAATGGATTAGCAAAGCAAAACTTGATTGGAAATGGAACCTGTGGGGCTGTCTACCGTGGTATCTTGCTGGACAATACAAGGGTAGCTGTCAAGAGAATAGTCAGTAACAGTTTCCAACAAGAGGATTTTATAGCGGAAATGGAGGCAATAGGGTATGCAAGGCACAAGAATTTGGTCAAGTTGCTTGGATATAATATAGGAAGAACTTGCAGAATGCTGGTCTATGAATATGTAGATAATGGAAGTTTGCATCACTGGCTTCACGAGTGTCCTGAACTGATTAGTCATCTGACATGGAACATTAGAACGAACATAATTGAAGGAGTTGCAAAAGGACTGGCCTACCTCCATGAGGATGCTGAACCAAAAGTCGTCCATGGATGCCTAAAATCAAGCAATATACTACTTGATCACCAATGGAATCCTAAAATCTCTGATTTTGGCCTCACCAAGATTTTAGGTCCTGATTGGGGTCACATTATATTGGGAGCATCAGGTTATTCAGGTCCCGATTGTGGTTCTAGAGGTGCTGCTTCTATCATGAGTGATGATGTTTATGCATTTGGAGTACTTATCATGGAGATTGCAACAGGGAGGACCCCTTTAGATCCTAACCAACCTCAGGAATATTTGATTGACTGGTTAAAGTCCATGGTTCAAAAACAAAAGTTAGCTTATGTGGTGGACTCAAAATTGCCAGAGCTGCCTCCCTTAAAAGAACTAAAGCGCATTGTTTTGATTGCTCTAAGATGCGTTGATCCTGATGTGAACCATAGGCCCAGAATGGGAGATGTGATTTACATGCTTGAGCCGAGTGACTTGTTGCTCTGTATGGTGCGGATAAGTTCTTCTTCTGTTGCTGCAAATCCCATATGA 1320 0.4121 MSTKHSPNLSQKFFGVQLWLLLVIFISLFIFMIFFILCVYFICYRHRKCYKTSVCISKPIACKQSQNALSTSSLDRRLLSGSISEIELNMNNGKFSGNQPSWFGGQCFGTITENSTLTNVGSVVKQSPVLKDGWRGNRISFKEIEIATNGLAKQNLIGNGTCGAVYRGILLDNTRVAVKRIVSNSFQQEDFIAEMEAIGYARHKNLVKLLGYNIGRTCRMLVYEYVDNGSLHHWLHECPELISHLTWNIRTNIIEGVAKGLAYLHEDAEPKVVHGCLKSSNILLDHQWNPKISDFGLTKILGPDWGHIILGASGYSGPDCGSRGAASIMSDDVYAFGVLIMEIATGRTPLDPNQPQEYLIDWLKSMVQKQKLAYVVDSKLPELPPLKELKRIVLIALRCVDPDVNHRPRMGDVIYMLEPSDLLLCMVRISSSSVAANPI* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00380 439 Pfam Protein tyrosine and serine/threonine kinase 153 414 IPR001245 GO:0004672|GO:0006468
Pte9g00380 439 ProSiteProfiles Protein kinase domain profile. 151 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00380 439 SUPERFAMILY Protein kinase-like (PK-like) 135 418 IPR011009 -
Pte9g00380 439 FunFam Putative receptor-like serine/threonine-protein kinase 226 430 - -
Pte9g00380 439 Gene3D Phosphorylase Kinase; domain 1 115 225 - -
Pte9g00380 439 PANTHER OS01G0323000 PROTEIN 9 424 - -
Pte9g00380 439 Gene3D Transferase(Phosphotransferase) domain 1 226 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00380 Pte-Chr9 4375524 4379204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00380 139 418 Receptor kinase-like Gene Family AT4G02010 40.000 1.09e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte9g00380 Pkinase 6.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00380 - - qsa:O6P43_008158 502.286