Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00379 ATGGCAGTCGGGATATCTGCCGCCATAACATCCCCAAAAACATTCTTTTCGTTCCAAAAGACACAACCCCTTCAAAACCGTACCCCCACGCTCTTGTTCACTCCCTTAAGCCTTCGTCACAGGTTGGTAAGGAATGCCAGAAGAGTGAGTAGCGTCACTGTTTTTGTTCTCATGGATGGCAAAAAACAAAGTCCGCAGATTGAGGAGCCTGCCGAGGAAGCAGCTGATAGTGTAAATTCTGAATTGATACCGCCCGGATTGGCAGAAAAACTGGCCAGGAAGAAATCCGAGAGGTTCACTTATCTTGTTGCTGCCGTGATGTCTAGCTTTGGTATTACTTCCATGGCTGCCATGTCAGTTTATTATAGATTTTCATGGCAAATGGAGGGTGGAGAGGTTCCTTTTTCCGAAATGTTTGGTACATTTGCTCTCTCTATTGGTGCTGCTGTTGGAATGGAATTTTGGGCTAGATGGGCACACAAAGCTCTGTGGCACGCTTCCTTGTGGCACATGCATGAGTCCCATCACCGACCTAGAGAAGGTCCATTTGAGCTTAACGATGTCTTCGCCATAATCAACGCTGTCCCAGCCATAGCCCTCCTCTCTTATGGCTTCTTCAACAAGGGCCTTTTCCCTGGCCTGTGCTTTGGTGCTGGACTTGGAATTACGGTGTTTGGAATGGCCTACATGTTTGTCCACGATGGTCTTGTTCACAAGAGATTCCCAGTTGGTCCCATTGCCAACGTGCCTTATTTCAGAAAAGTTGCTGCTGCTCACAAGCTGCATCATTCAGACAAATTCAATGGTGTACCATATGGGTTGTTTCTAGGTCCTAAGGAACTTGAGGAAGTTGGAGGACTAGAAGAATTGGAAAAGGAGATTGAAAGGAGAATAAAATCATATAAACGCTCATGA 915 0.4623 MAVGISAAITSPKTFFSFQKTQPLQNRTPTLLFTPLSLRHRLVRNARRVSSVTVFVLMDGKKQSPQIEEPAEEAADSVNSELIPPGLAEKLARKKSERFTYLVAAVMSSFGITSMAAMSVYYRFSWQMEGGEVPFSEMFGTFALSIGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFNKGLFPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRKVAAAHKLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEIERRIKSYKRS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00379 304 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Pte9g00379 304 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00379 Pte-Chr9 4371315 4373250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00379 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 58.261 5.94e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00379 K15746 - qsa:O6P43_008161 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte16g00305 16 3937838 3939811 Pte9g00379 9 4371315 4373250 RCT
Pte9g00379 9 4371315 4373250 Pte9g00379 9 4371315 4373250 RCT