Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00370 ATGCTCAATCCAGTTGAGTACAGCACCATCACTAACACGCCCATTTTCGGTTCTCGTAAGTTCCTGCTTTTCCTGAATGGCGTCATTCCAAGAACACCACCAACCCCAAAGCTCTGTTTCCTCATAAAATGCAACCCACCTACGTTGTCTGCCAAATGCAACACGACCCCTCATGATGAAAAGTCGTTCACAGCGTCATACCTCGTGGACAATTGTGGGTTCTCGCTCGAAACTGCATTATGGCTATCCAAGCGTGTCAAATTGAAGAACGCTGAAAATCCCAATTCTGTTTTGACCATCCTCAGAAACTATGGCTTCTCAGACTCTCAGATACTTCGCGTCATTCAGCGCGCCCCAGTGATTCTTCTCTACGACCCTGTAAAATCAATTTTACCCAAATTCGAGTTCCTTCAATCAAAAGGGGTTTCAAGCTCGGAACTTGCTGAAATGGTAACATACAGCCCTTATATTTTAAAAAGAAGCTTAGAAAATCACATTATTCCTTGTTTTGATATTATAAAGAACTTGCTTCAATCTGAAGAGTTAGCGGTTTCTTGGATGGTAAGATGGCCGTGTCTCGTTTCTCTTTATAATCTCAAAGCTAACATCCAAGTGCTTCTTGATAGTGGGGTTCCTGAGTTGTATGTTTGTAGGTTACTTGAGAGGAGGCCTTCTTTGTTCCTCAGACAGTCCAGTACTTTTAGGGAAGGAGTGGACAAGTTAAAGAAACTCGGTTTCAATCCTTCACGTGCATATTTCATAGTAGGTTTTGTGGCCATGAATGGTATGAGCAAAGCCAAGTGGGAGCGAAAGATTGAGATATTTAAGAAGTGGGGTTGGACTGAAGATGTTGTTCTCACTGCATTCAGAAAGTTTCCGAATATGATGTTGGCATCTGAAAGTAAAATCATGGCGGTGATGGACTTTTTGGTGAACCAAATGGGTTGTGATCCCATGCTGGTCGCTAGACAACCAAATGTTTTGAAAAAGCGTCTGGAGGGAAGGATCATTCCAAGGTCTCGTGTTGTGCTTTACCTTCATTCGAGAGGTTTGATTAGGAAGGATGCCAGCTTAATCACCCCACTCGTCGTTTCTGAAAATGCGTTCCTTGAGACTTATGTCAAACGTTTGAAGAGAGATGCTCCCCATTTGATGAATCTTTATGGAGAAAATTTGAAATATTCTAATGACAAATAG 1197 0.4219 MLNPVEYSTITNTPIFGSRKFLLFLNGVIPRTPPTPKLCFLIKCNPPTLSAKCNTTPHDEKSFTASYLVDNCGFSLETALWLSKRVKLKNAENPNSVLTILRNYGFSDSQILRVIQRAPVILLYDPVKSILPKFEFLQSKGVSSSELAEMVTYSPYILKRSLENHIIPCFDIIKNLLQSEELAVSWMVRWPCLVSLYNLKANIQVLLDSGVPELYVCRLLERRPSLFLRQSSTFREGVDKLKKLGFNPSRAYFIVGFVAMNGMSKAKWERKIEIFKKWGWTEDVVLTAFRKFPNMMLASESKIMAVMDFLVNQMGCDPMLVARQPNVLKKRLEGRIIPRSRVVLYLHSRGLIRKDASLITPLVVSENAFLETYVKRLKRDAPHLMNLYGENLKYSNDK* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00370 398 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 SMART mt_12 112 143 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 SMART mt_12 148 179 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 Pfam mTERF 263 370 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 Pfam mTERF 98 304 IPR003690 GO:0003690|GO:0006355
Pte9g00370 398 FunFam Mitochondrial transcription termination factor-like 162 381 - -
Pte9g00370 398 Gene3D Transcription termination factor 3, mitochondrial 196 380 IPR038538 -
Pte9g00370 398 Gene3D Transcription termination factor 3, mitochondrial 77 195 IPR038538 -
Pte9g00370 398 PANTHER CGI-12 PROTEIN-RELATED 61 376 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00370 Pte-Chr9 4345913 4347526 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte9g00370 mTERF 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00370 K15031 - qsa:O6P43_003535 313.538