Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00358 ATGAAATCCATAAATGCATTTCAACAACATCCTATACTGTACTTGAGCTATATACTATTATTTAAGCATACCCAGGAGACCCTTTTTCTTTGTCAAAACAGAAACACCAGATTCTCATCATACAATTATAATTATTCATCAGCCATGGCAGGTGAAGCTGTCAAAAAGGAAGAAGGTGCAGTAGTGAGGGTGAAAATCACTGGTAAGAGCCATGTGAAGCCTGAAAAGAAGATTGGGAAACAAGAGTGTCAGCTTGTCACATTTGATCTCCCTTATCTTGCTTTCTACTACAACCAGAAATTGATGTTTTACAAGGGGGATGACTTTGAGGGTATGGTGAAGAAACTCAAGGAGGGCCTTTCTGTGGTGTTGGAAGAGTTTTATCAATTAGCTGGGAAGCTTGGGAAAGATGAAGATGGCATTTTCAGAGTTGAGTATGACGATGACATGACCGGAGTTGAGGTGTTGGAAGCTGCTGCTCATGAAATCGGCATAGCAGATCTTGCTGTGGAAGATGGTACCTCCGGATTGAAGGATTTGATACCATACAATGATATCTCGAACTTGGAAGGCATGCACAGGCCCTTGCTTGCAATTCAGCTAACGAAACTGAAAGATGGACTGGCAATAGGATGCGCGTTCAACCATGCGGTTCTCGACGGTACTTCCACATGGCACTTCATGAGTTCATGGGCCGAGATCTGCAGTGGGTCCAAATCCATTTCGGTCCAACCATTCCTTGAGCGCACGAAGGCGCGTAATACGCGCGTGAAGCTCGATCTTTCTCTCCCGCCGGACCCACATGCGGCTTCATTGAACGGCTCTACTGAGTGCAAACCGGTCTTACAAATCAGAGAGAAGGTCTTCAAATTCTCTGAGGCCCAGGTGGACAAGATTAAGTCAACGATCAACGGAAAACTCCTATCTGACGGTTCAAAACCATTCTCAACATTCCAATCTCTCTCCGTCCATATTTGGCGTCATGTAACCCATGCACGTAACCTGAAGCCAGAGGACATCACCGTGTTCACTGTCTTTGCCGATTGCAGGAAACGGATTGACCCACCCATGCCGGACAGCTACTTCGGCAACCTAATCCATGCCGTGTTCACGGGAACAGCTGCCGGATTGCTGACAGCAAATCCACCTGAATTTGGTGCATCCGTTATACAGAAAGCAATAGAGATGCACAATGCTAAGGCTATTGATGAAAGGAACAAGGAGTGGGAGAGTGCTCCCAAGATTTTTCAGTTCAAGGATGCTGGAATCAACTGTGTCGCGGTCGGCAGCTCTCCAAGGTTTAAGGTGTATGAGGTGGATTTTGGGTGGGGAAAGCCAGAGGGAGTGAGGAGTGGCTCGAATAATAGGTTTGATGGGATGGTGTATTTGTATCAAGGGAAGAGTGGTGGAAGGAGCATTGACGTGGAGATAAGCTTGGAAGCTGGAGCAATGGAGAGGTTGGAGAAGGACAAGGAGTTTCTTTTGGAACCCTAA 1494 0.4639 MKSINAFQQHPILYLSYILLFKHTQETLFLCQNRNTRFSSYNYNYSSAMAGEAVKKEEGAVVRVKITGKSHVKPEKKIGKQECQLVTFDLPYLAFYYNQKLMFYKGDDFEGMVKKLKEGLSVVLEEFYQLAGKLGKDEDGIFRVEYDDDMTGVEVLEAAAHEIGIADLAVEDGTSGLKDLIPYNDISNLEGMHRPLLAIQLTKLKDGLAIGCAFNHAVLDGTSTWHFMSSWAEICSGSKSISVQPFLERTKARNTRVKLDLSLPPDPHAASLNGSTECKPVLQIREKVFKFSEAQVDKIKSTINGKLLSDGSKPFSTFQSLSVHIWRHVTHARNLKPEDITVFTVFADCRKRIDPPMPDSYFGNLIHAVFTGTAAGLLTANPPEFGASVIQKAIEMHNAKAIDERNKEWESAPKIFQFKDAGINCVAVGSSPRFKVYEVDFGWGKPEGVRSGSNNRFDGMVYLYQGKSGGRSIDVEISLEAGAMERLEKDKEFLLEP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00358 497 Gene3D - 61 261 IPR023213 -
Pte9g00358 497 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 66 494 - -
Pte9g00358 497 FunFam Tryptamine hydroxycinnamoyl transferase 271 491 - -
Pte9g00358 497 Gene3D - 272 490 IPR023213 -
Pte9g00358 497 Pfam Transferase family 63 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00358 Pte-Chr9 4214703 4217727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00358 62 496 Monolignol Biosynthesis Gene Families AT5G48930 26.580 8.68e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00358 K19747 - qsa:O6P43_008177 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00358 9 4214703 4217727 Pte9g00358 9 4214703 4217727 RCT