Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00320 ATGACTCCCTCCTTGTATCCGTACTTTCTTCTTCTAATCCTGCCCATTCCATTTCTTATTCTTCGTAGGTACACCGCCAGGCGCTCTCGTACGTCGGAGAAGCTGCCACTTCCACCTAGTCCTCCATCATGGCCGCTTGTTGGACACCTTTTCCGAGTTGGAAGAAAGCTTCATATCCGATTTGCTGAATTCTCACAACAATATGGACCTCTTGTATCACTCAGACTTGGCAGTGTGTTTATGGTGGTCGCTTCCACTCCAGAGGCTGCTTCCGAGATTCTGCGGACTCACGACCGCGTACTCTCAGGTCGAGCCATTCCGCCATTCCTACCGTACAAGCACCAAGCTCTCAATGGCGGGTCTATTCTGTGGGCCTCAGAATGCGATGAAAACTGGAAGTCACTAAGAGCAGTCTGCCAGACCCAATTGTTTTCTGCTACTGCTATACAGTCACAGGTCAGTTTGAGAGAGAAAACGGCAGCTCAAATGGTGGAGTACTTGAGAAGTATGGAGGGACAAATTGTGTGTATACCACAAGTTTTGTCTACAGCAGTTCTCAACGCCTTGTCCAACCTCCTCATCTCCGAGGACTTGCTTTCCTTTGAGGATCCAGAAGAGAATGGATTGAGAGCCGCTATTAAGAGGATTCTGGAGCTGGCAACAACCCCAACTGTGGCAGATTTCTATCCTAAGCTGGAAGCACTAGATATCAATGGAGTGGGAAAGAAGGCTGCTCAAGCTTTGAAGGAATTTCAGAATATCTGGAAAGATATTCTGAACGGAAGGTCTCGGAGCTTTAGATGTGAGGCTCATGAACACGATGATGCGAAACTCCACAGGGACTTGATGGATTGCTTTCTTGCCAACAACTTCTCCGATGATAAAATCAACACCATATTTGTCGAACTCTTCTTTGCTGGGAGTGACGCCACTGTCACGACAGTTGAGTGGGCACTGACCGAGTTAATCAGAAATAGAGGAGCTATGCAGAAACTCAAACAAGAACTTAGCCAGGCACTCTCAGGAAAGGGAAACACAGTACAAGAGTCTCTCCTATCTAACCTCCCATATCTGCTGGCTTGCATTAAAGAGACATTTAGATTACATCCAGCAGTCCCACTCCTGGTTCCACATCGAGCTGTTGAGGAGTGCGAGGTAATGAATTACAGAATTCCCAAGGACTCGAGATTGATCATTAATGTCTGGGCAATTGGTCGCGACCCTTCTGTGTGGGAAGATTCATGGTGTTTTAAACCCGAGAGATTTTTGGATTGCAATATGGACTTCAAAGGTCAAGACTTTGAGTTGCAGCCATTTGGTTCTGGAAGGAGAATTTGTCCAGGATATCCATTAGCTTCCAAGCAAGTAGCTTTGCTTCTTGCTTCTCTTGTTGTTTTCTTTGATTGGGATCTTCCTGATGGCTGTGATGCAGCCCAACTAGACATGAATGAAAAGTTCTCTTTGACCTTGTGCAAGGAGCAAGCTTTGCTGGCTGTGCCTAAACCGACCATGCCATGA 1518 0.4664 MTPSLYPYFLLLILPIPFLILRRYTARRSRTSEKLPLPPSPPSWPLVGHLFRVGRKLHIRFAEFSQQYGPLVSLRLGSVFMVVASTPEAASEILRTHDRVLSGRAIPPFLPYKHQALNGGSILWASECDENWKSLRAVCQTQLFSATAIQSQVSLREKTAAQMVEYLRSMEGQIVCIPQVLSTAVLNALSNLLISEDLLSFEDPEENGLRAAIKRILELATTPTVADFYPKLEALDINGVGKKAAQALKEFQNIWKDILNGRSRSFRCEAHEHDDAKLHRDLMDCFLANNFSDDKINTIFVELFFAGSDATVTTVEWALTELIRNRGAMQKLKQELSQALSGKGNTVQESLLSNLPYLLACIKETFRLHPAVPLLVPHRAVEECEVMNYRIPKDSRLIINVWAIGRDPSVWEDSWCFKPERFLDCNMDFKGQDFELQPFGSGRRICPGYPLASKQVALLLASLVVFFDWDLPDGCDAAQLDMNEKFSLTLCKEQALLAVPKPTMP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00320 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Pte9g00320 505 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 18 502 - -
Pte9g00320 505 FunFam Predicted protein 304 498 - -
Pte9g00320 505 Pfam Cytochrome P450 38 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 CDD CYP76-like 65 500 - -
Pte9g00320 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte9g00320 505 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00320 Pte-Chr9 3820275 3822042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00320 8 500 Cytochrome P450 AT2G45550 39.286 4.89e-124 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00320 - - qsu:112033921 497.664