Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00308 ATGGGCTTACTCCATCGGATTTTCGGGACCAAGAAACAATCGGCAAACTCAGATCGGTCGGGTTCCAAACAAGTTAAGCAAAAGAGAAGGTGGAGCTTCGTGAAGTCCAGCAACGACAAGTCTCAATTGACAACACCTTGTTCCTCTCGCTTCAATGGGTTGGATAATCCATCTACTTTGTCGGGTGTGATCGGTGGCTCATTGGATGCTAACAAGCATGCCATAGCCGTGGCTGCAGCTACTGCAGCAGTGGCGGAGGCGGCACTTGCAGCTGCACATGCAGCGGCTGAAGTGGTTAGGCTGACAAGTAGTGCCGGTACCAGTGTTCCTAGGCGTGCTTCCTCTCACGTTAGCAACAGCCAGAGAGTGTTGGTTGAAGAAATTGCAGTTGTTAAGATACAGTCGGCATTCCGAGGTTACTTGGCAAGAAGGGCTCTAAGGGCACTCAAGGCGTTGGTAAAGTTGCAAGCATTAGTAAGGGGACATATAGTGCGGAAGAAAACTACAGATATGCTGAGGAGGATGCAAACTCTGGTGAGATTGCAATCACGTGCACGTGCAAGTCGAATGAGCATGACAGAGACTCTTCATTCTAGCAAATCTTCCCTATCACACTATCCTATCCCTGTAAGGAATGATAATTGGGAGCATTCATACAATACTCATGGTAACAAATTTGAAGGATCCTCTGTCTTGAAGAGGTGTAGCTCAAATTCAAATTTCAGGGAGATTGATGCTGGAAGAACACAGTTAGACACAAATTGGCTAGATCGTTGGATGGGAGAAAATTTATGGACTCATCGAGGAGATTCTTTGTTGAAAACTAAAAATGATAGGAGTGATAAAATTCTAGAAGTAGATACTTGGAAGCCACGTCTTATCTCTCAACCAAGCAGTAGCTCCTTTCATTTATATAATTCTACACTTGCTTCTGATTGTAAATGCGTGGATGTTGCACCGTATGACTCTCCATCAAAACCACCAAGGAAACAAATTAATCCGAGTCTATTTTCAATGGATGCTTCAGCTTTGAGCTATCTAAATTTTCCCGAAGGGAAAGATGAGGCAGCTTCACGGACAACTGAGAACAATCCCGCATTTTCGGCCTCGTCTAGGCCTGGAAGTGGTGCAAGGAGAAGTCCATCTACACCAACAAGAAGTGAATACTCCTGGGGTTTCTTTAATGGCTGTTCTGATCATCCCAACTACATGACAAACACAGAATCCTCTAGGGCCAAGGCTAGGTCACTGAGTGCTCCTAGACAAAGATTTGAGTTTGAGAGGTCTGGTTCCACAAGGAGGTCTATACAGGGACCCTTGGATGCTGGGAAGTACAAAGGTGATGCTTGA 1350 0.4541 MGLLHRIFGTKKQSANSDRSGSKQVKQKRRWSFVKSSNDKSQLTTPCSSRFNGLDNPSTLSGVIGGSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSAGTSVPRRASSHVSNSQRVLVEEIAVVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTTDMLRRMQTLVRLQSRARASRMSMTETLHSSKSSLSHYPIPVRNDNWEHSYNTHGNKFEGSSVLKRCSSNSNFREIDAGRTQLDTNWLDRWMGENLWTHRGDSLLKTKNDRSDKILEVDTWKPRLISQPSSSSFHLYNSTLASDCKCVDVAPYDSPSKPPRKQINPSLFSMDASALSYLNFPEGKDEAASRTTENNPAFSASSRPGSGARRSPSTPTRSEYSWGFFNGCSDHPNYMTNTESSRAKARSLSAPRQRFEFERSGSTRRSIQGPLDAGKYKGDA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00308 449 MobiDBLite consensus disorder prediction 9 45 - -
Pte9g00308 449 Gene3D - 126 178 - -
Pte9g00308 449 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Pte9g00308 449 MobiDBLite consensus disorder prediction 404 449 - -
Pte9g00308 449 PANTHER IQ-DOMAIN 5-RELATED 24 430 - -
Pte9g00308 449 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Pte9g00308 449 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Pte9g00308 449 Pfam Protein of unknown function (DUF4005) 367 429 IPR025064 -
Pte9g00308 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 171 IPR027417 -
Pte9g00308 449 MobiDBLite consensus disorder prediction 353 386 - -
Pte9g00308 449 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Pte9g00308 449 MobiDBLite consensus disorder prediction 359 386 - -
Pte9g00308 449 SMART iq_5 148 169 IPR000048 GO:0005515
Pte9g00308 449 SMART iq_5 125 147 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00308 Pte-Chr9 3412482 3416208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00308 1 438 IQD Protein Family AT5G62070 42.920 1.14e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00308 - - qsa:O6P43_005562 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00308 9 3412482 3416208 Pte9g00308 9 3412482 3416208 RCT