Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00307 ATGGGTCCTTCCCGAGGGACTGGAGGGTTCAGTCAATCCTCTGCAAGTTCTGGAATATTCTTTCAAGGGGATATGCAGTCTCAGACTTTGGTCAACTCTCACTTAAACTCGTCCTTTGGAAACTCATCTAACTCTATGCCTGTAACTGGGCAATCGATTTTGGGTCCAGCTTCTGGGGACATGAACAATGTTATGTTAAATAGCGTTGCAAACTCTGCACCAAGTGTTGGAGCAAGTTCTTTGGTGACTGATGCTAATTCAGCAGTTTCTGGAGGTCCTCATTTGCAGAGAAGTGCAAGCTTTAACACTGACTCTTATATGCGGTTACCAGCTTCACCCATGTCTTTCTCGTCAAATAATATCAGTATCTCAGGCTCCTCAGTTATAGATGGTTCTTCTGTTGGACAGCAGAATTCTCATCATGATCCCAATGGACAATATGTGCAACAGACTCAGCTGCAACAGCAGCCGAGAGGAGCTTCAAGTGCTACGTCTTTACCTAAGTCTCAAACTAGTCATTCTCAAATCCCCATGGTCGCAAGGGCAGCTGGATCTTTTGTGCAGGATCCAAGTAATTTGTTGCATCTGCAGAAGAAACCTAGGCTTGATGTGAAACAGGAGGATATTTTAAACCAGCAGGTAATACAGCAGCTGCTTCAGGGACAGGATCCCTCACAATTTCAAGGCCGTAATGCACAGTTGCAAGCTTTGTTTCAACAGCAAAGATTGAGACAGCAACAGCAACATATTCTGCAGTCTATGCCACAGTTACAGAGAGCCCAATTGCAGCAACAGCAGCAACAGATGCAAATGAGACAGCAGCTTCAGCAACCAGCAGTGCAGCCTCCATCTGCAGTGAAGCGGCCATATGATGGTGGGGTATGTGCCCGCAGGTTGATGCAATACCTATATCATCAGCACCAGCGACCTCAAGAAAACAGCATTGCATACTGGAGGAAATTTATTGCAGAGTATTATTCTCCTCGGGCAAAGAAAAGATGGTGCCTGTCATTATATGAGAATGTTGGTCATCATGCACTCGGTGTTTTTCCCCAAGCAGCAATGGATGGATGGCAATGCGATATATGTGGCTCTAAATCTGGAAGGGGATTTGAGGCTACTTTTGAAGTACTTCCCAGACTTAATGAGATCAAATTTGGAAGTGGAGTTATCGATGAGCTATTGTTTGTGGACTTGCCACGTGAGTGTAGATTTCCTTCTGGAATTATGATGTTAGAATATGGAAAGGCAGTTCAAGAAAGTGTATACGAGCAACTACGAGTGGTTCGGGAGGGTCAGCTACGCATTATATTCACACAGGATTTGAAGATATTATCTTGGGAATTCTGTGCAAGGCGCCATGAAGAACTGCTTCCTCGTAGGTTGGTTGCACCACAGGTGAATCAATTAGTCCAGGTAGCACAAAAATGTCAGAATACAATTGCGGATAGTGGACCTGATGGCATATCACAACAGGATTTGCAGGCAAATAGCAACATGGTACTGACAGTTGGGCGTCAGCTTGCCAAGACTTTGGAGTTACAGTCATTGAATGACTTAGGTTTCTCAAAACGATATGTGAGGTGCTTGCAGATCTCTGAGGTGGTCAATAGCATGAAAGATCTCATAGATTTTTGCAGAGACCACAAAGTCGGACCCATTGATGGGCTTAAAAGTTATCCTCGACATGCAGCAGCATCCAAGCTTCAGATGCAAAAGACGCAGGAGTTGGAGCAGCTAGCTAATGCACAAGGTCTGCCTACCGATCGAAGTGCTATTAATAAGATGGTAACGATGCATTCAAACCAAATAAGCAGAGACCATATCATTGCCAATCGTGGTGCGTTAAGTGGTCCAGCTCAGGCTGCTTTGGCCCTGTCCAACTTCCAGAACCTTCTCTCGAGACAAAACTCGACGAACTCAAACAACAGCTCCATTCACCAAGAAGCATCGTCTTCCTTCAGCAATGGGAACCAGATCACATCTTATACCATCCGAGGAGCTCCTGCTTCCAATCCAGGATCCATGCAGAGCATGCCTGGTAGCGGTCTCTCCAGTCCTCATTTGGGGTCTCAGCATCACCAGCAACAACAGTTTCAGCAACAATCTTTGAGTGCCAATAGTTTACTGCAAAGAAATCTCTCACAATCCTCCCAAGGAAATCAGGCTTTACAACAGCAGCAGATGATCCAGCAACTCCTGCAGGAAATGTCAAATAGCAATGGGGGAGGAGTTCAACCACAGTCTCTTGCAGGGCCTAATGCTAATGCGAATATGGCAACAAGTGGAATAGGCGTAGGAGGCTACACCCCAATGCTGACAGCGTCTACCACCAATCTGCCTGGTAGCAACGGACTTGCCCCTAGCCGAAGCAATAGTTTCAAAGCTGCTTCGAACAGTGACTCATCTGCAGCAGCTGGTGTCAATGATGGATTTAACCAAAGAGCACCAGATGTGTCTCAGAACATGCATCTGCATGATAATGTAATTCAGGATATTGCTCGTGAATTCACAGATAACGGGTTCTTTAGTGAACTCGACGACAACATGGCCTTTGGGTGGAAGGCGCGAGACTAA 2577 0.4575 MGPSRGTGGFSQSSASSGIFFQGDMQSQTLVNSHLNSSFGNSSNSMPVTGQSILGPASGDMNNVMLNSVANSAPSVGASSLVTDANSAVSGGPHLQRSASFNTDSYMRLPASPMSFSSNNISISGSSVIDGSSVGQQNSHHDPNGQYVQQTQLQQQPRGASSATSLPKSQTSHSQIPMVARAAGSFVQDPSNLLHLQKKPRLDVKQEDILNQQVIQQLLQGQDPSQFQGRNAQLQALFQQQRLRQQQQHILQSMPQLQRAQLQQQQQQMQMRQQLQQPAVQPPSAVKRPYDGGVCARRLMQYLYHQHQRPQENSIAYWRKFIAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDGWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFVDLPRECRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQNTIADSGPDGISQQDLQANSNMVLTVGRQLAKTLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCRDHKVGPIDGLKSYPRHAAASKLQMQKTQELEQLANAQGLPTDRSAINKMVTMHSNQISRDHIIANRGALSGPAQAALALSNFQNLLSRQNSTNSNNSSIHQEASSSFSNGNQITSYTIRGAPASNPGSMQSMPGSGLSSPHLGSQHHQQQQFQQQSLSANSLLQRNLSQSSQGNQALQQQQMIQQLLQEMSNSNGGGVQPQSLAGPNANANMATSGIGVGGYTPMLTASTTNLPGSNGLAPSRSNSFKAASNSDSSAAAGVNDGFNQRAPDVSQNMHLHDNVIQDIAREFTDNGFFSELDDNMAFGWKARD* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00307 858 MobiDBLite consensus disorder prediction 782 816 - -
Pte9g00307 858 PANTHER LIM DOMAIN-BINDING PROTEIN 42 843 IPR029005 -
Pte9g00307 858 MobiDBLite consensus disorder prediction 262 287 - -
Pte9g00307 858 MobiDBLite consensus disorder prediction 636 704 - -
Pte9g00307 858 MobiDBLite consensus disorder prediction 262 281 - -
Pte9g00307 858 Coils Coil 257 277 - -
Pte9g00307 858 Pfam LIM-domain binding protein 298 558 IPR029005 -
Pte9g00307 858 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00307 Pte-Chr9 3401032 3410663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00307 281 567 C2H2 Transcription Factor Family AT1G43850 58.188 1.73e-109 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00307 - - pper:18787712 1077.77