Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00298 ATGGGTCCTTCCCGAGGGACTGGAGGGTTCAGTCAATCCTCTGCAAGTTCTGGAATATTCTTTCAAGGGGATATGCAGTCTCAGACTTTGGTCAACTCTCACTTAAACTCGTCCTTTGGAAACTCATCTAACTCTATGCCTGTAACTGGGCAATCGATTTTGGGTCCAGCTTCTGGGGACATGAACAATGTTATGTTAAATAGCGTTGCAAACTCTGCACCAAGTGTTGGAGCAAGTTCTTTGGTGACTGATGCTAATTCAGCAGTTTCTGGAGGTCCTCATTTGCAGAGAAGTGCAAGCTTTAACACTGACTCTTATATGCGGTTACCAGCTTCACCCATGTCTTTCTCGTCAAATAATATCAGTATCTCAGGCTCCTCAGTTATAGATGGTTCTTCTGTTGGACAGCAGAATTCTCATCATGATCCCAATGGACAATATGTGCAACAGACTCAGCTGCAACAGCAGCAGAGAGGAGCTTCAAGTGCTACGTCTTTACCTAAGTCTCAAACTAGTCATTCTCAAATCCCCATGGTCGCAAGGGCAGCTGGATCTTTTGTGCAGGATCCAAGTAATTTGTTGCATCTGCAGAAGAAACCTAGGCTTGATGTGAAACAGGAGGATATTTTAAACCAGCAGGTAATACAGCAGCTGCTTCAGGGACAGGATCCCTCACAATTTCAAGGCCGTAATGCACAGTTGCAAGCTTTGTTTCAACAGCAAAGATTGAGACAGCAACAGCAACATATTCTGCAGTCTATGCCACAGTTACAGAGAGCCCAATTGCAGCAACAGCAGCAACAGATGCAAATGAGACAGCAGCTTCAGCAACCAGCAGTGCAGCCTCCATCTGCAGTGAAGCGGCCATATGATGGTGGGGTATGTGCCCGCAGGTTGATGCAATACCTATATCATCAGCACCAGCGACCTCAAGAAAACAGCATTGCATACTGGAGGAAATTTATTGCAGAGTATTATTCTCCTCGGGCAAAGAAAAGATGGTGCCTGTCATTATATGAGAATGTTGGTCATCATGCACTCGGTGTTTTTCCCCAAGCAGCAATGGATGGATGGCAATGCGATATATGTGGCTCTAAATCTGGAAGGGGATTTGAGGCTACTTTTGAAGTACTTCCCAGACTTAATGAGATCAAATTTGGAAGTGGAGTTATCGATGAGCTATTGTTTGTGGACTTGCCACGTGAGTGTAGATTTCCTTCTGGAATTATGATGTTAGAATATGGAAAGGCAGTTCAAGAAAGTGTATACGAGCAACTGCGAGTGGTTCGGGAGGGTCAGCTACGCATTATATTCACACAGGATTTGAAGATATTATCTTGGGAATTCTGTGCAAGGCGCCATGAAGAACTGCTTCCTCGTAGGTTGGTTGCACCACAGGTGAATCAATTAGTCCAGGTAGCACAAAAATGTCAGAATACAATTGCGGATAGTGGACCTGATGGCATATCACAACAGGATTTGCAGGCAAATAGCAACATGTGA 1503 0.4464 MGPSRGTGGFSQSSASSGIFFQGDMQSQTLVNSHLNSSFGNSSNSMPVTGQSILGPASGDMNNVMLNSVANSAPSVGASSLVTDANSAVSGGPHLQRSASFNTDSYMRLPASPMSFSSNNISISGSSVIDGSSVGQQNSHHDPNGQYVQQTQLQQQQRGASSATSLPKSQTSHSQIPMVARAAGSFVQDPSNLLHLQKKPRLDVKQEDILNQQVIQQLLQGQDPSQFQGRNAQLQALFQQQRLRQQQQHILQSMPQLQRAQLQQQQQQMQMRQQLQQPAVQPPSAVKRPYDGGVCARRLMQYLYHQHQRPQENSIAYWRKFIAEYYSPRAKKRWCLSLYENVGHHALGVFPQAAMDGWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFVDLPRECRFPSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQNTIADSGPDGISQQDLQANSNM* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00298 500 Coils Coil 257 277 - -
Pte9g00298 500 Pfam LIM-domain binding protein 298 482 IPR029005 -
Pte9g00298 500 PANTHER LIM DOMAIN-BINDING PROTEIN 42 500 IPR029005 -
Pte9g00298 500 MobiDBLite consensus disorder prediction 262 287 - -
Pte9g00298 500 MobiDBLite consensus disorder prediction 262 281 - -
Pte9g00298 500 MobiDBLite consensus disorder prediction 127 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00298 Pte-Chr9 3311481 3317289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00298 281 470 C2H2 Transcription Factor Family AT1G43850 61.579 2.82e-79 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00298 - - pper:18787712 715.687