Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00291 ATGTATTCTTCAGCACATTTCTCAGACCCTTATCCTATTGGATTAGAAGTTCTCTCGTCTGAAACAGCAGTCTCGGGGTCACCAGTTTCTGATTGTTGCAGTGCTCCTCGTGCTGCTAATTTATCTGAAGAAGATGTAATGCTGGCTGCCAGTTGCCCCAAAAAGCGTGCTGGCAGGAAGAAGTTCAAGGAGACTCGGCACCCAGTGTATAGAGGAGTACGTAGAAGGAACTCGGGTAAGTGGGTGTGTGAAGTTAGAGAACCTAACAAGAAGACAAGGATTTGGCTGGGGACTTTTCCGACAGCCGAGATGGCTGCACGAGCCCATGATGTGGCGGCAATAGCATTGAGGGGTCGATCAGCTTGTTTGAATTTCGCTGACTCTGCGTGGAGATTACCGATTCCAATGTCGACGGAAGCAAAGGATATCCAGAAGGCGGCGGTCGAAGCAGCGGAGGCATTCCGGCAGGAAACAGTGGAGTCGGAAGTGGATGAAACAAAGCTGAAGAATATCGAAGCGACGAAGAAATCCGTGGAAGTAAAGGAGAAGAATGTGTTTTATATGGATGAAGAGGTGCTGTTTGGGATGCCCAGACTGCTGACAAACATGGCAGAAGGGATGTTGTTGCCGCCACCGCCACAAGGGGATGGGAGTGGAACTGCTGATGTGGACATTGAAGAAGCTGAGGTGTCACTATGGAGTTACTCATTGTAA 714 0.493 MYSSAHFSDPYPIGLEVLSSETAVSGSPVSDCCSAPRAANLSEEDVMLAASCPKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSAWRLPIPMSTEAKDIQKAAVEAAEAFRQETVESEVDETKLKNIEATKKSVEVKEKNVFYMDEEVLFGMPRLLTNMAEGMLLPPPPQGDGSGTADVDIEEAEVSLWSYSL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00291 237 FunFam Ethylene-responsive transcription factor 2 68 127 - -
Pte9g00291 237 SUPERFAMILY DNA-binding domain 69 128 IPR016177 GO:0003677
Pte9g00291 237 CDD AP2 70 128 IPR001471 GO:0003700|GO:0006355
Pte9g00291 237 SMART rav1_2 69 132 IPR001471 GO:0003700|GO:0006355
Pte9g00291 237 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 31 235 IPR045277 GO:0003700
Pte9g00291 237 ProSiteProfiles AP2/ERF domain profile. 69 126 IPR001471 GO:0003700|GO:0006355
Pte9g00291 237 Gene3D AP2/ERF domain 69 127 IPR036955 GO:0003700|GO:0006355
Pte9g00291 237 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Pte9g00291 237 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Pte9g00291 237 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00291 Pte-Chr9 3236001 3236714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00291 27 235 AP2-EREBP Transcription Factor Family AT5G51990 60.909 1.71e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte9g00291 AP2 1.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00291 - - qsa:O6P43_008272 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00291 9 3236001 3236714 Pte9g00291 9 3236001 3236714 RCT