Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00273 ATGTTTCCTTTACACCAAGGCAAGGAGCTGGTTTTCTCTTCAACCCCACAAAAGCGAGAGGACCAGCAAATCTTGGAAGATCTGATTTTGGATAGCCATAATCATTATCTGGATTGCAATCACAATACTATTCCTAAGCATTTCGACGGAAAAAGACAGCGGACGCACCATGGCTTTGATGATAGCTATAATGGTTATCATGATCGAAAGAGAATGCACAGGGACAACGAGAGGCAAAAAAGACATGAAATGTCTACCCTTTATACTTCACTTAGAGCGCTTCTCCCTTATGAGGTCATCAAGGGGAAGCGTTCGATTTCAGATAATTTGAGTGAGGCAGTGAATTACATCAAGCACTTACAGAAGAAAATCACAGAGTTAAGTGCCAAGAGAGATGAACTGAAGAAAGTATCCAACTTGAGAGCTGAAGAGCATATCAACTGCAGTTCAAGTAGTTCAGTTGTGATTCGTGAAATATGTGGGGGAGCAAAAACTGAAATTAATAGGTTTGTAGAAGATGGTCTGCCCCTTTCAAGAGTACTAGGAGTTTTACTTGAACAAGGACTTGATGTAGTTAGCAGTGTTTCCACCACTGTGAAAGGAAGACTATTTCAATATATCCAGCATGAGGCTGTAAATTCCACAAGTGTAGACCCTTCTGTGTCAGAAGGCGAAGTAATTAAGAGAGAAGCTCCTTCATCTGGCAACGTTTCATACACGAAGTCCAATTGTGACCGAGTGAAAGTATGA 750 0.4107 MFPLHQGKELVFSSTPQKREDQQILEDLILDSHNHYLDCNHNTIPKHFDGKRQRTHHGFDDSYNGYHDRKRMHRDNERQKRHEMSTLYTSLRALLPYEVIKGKRSISDNLSEAVNYIKHLQKKITELSAKRDELKKVSNLRAEEHINCSSSSSVVIREICGGAKTEINRFVEDGLPLSRVLGVLLEQGLDVVSSVSTTVKGRLFQYIQHEAVNSTSVDPSVSEGEVIKREAPSSGNVSYTKSNCDRVKV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00273 249 Gene3D - 63 149 IPR036638 GO:0046983
Pte9g00273 249 SMART finulus 74 126 IPR011598 GO:0046983
Pte9g00273 249 CDD bHLH_AtORG2_like 69 145 - -
Pte9g00273 249 Coils Coil 110 137 - -
Pte9g00273 249 Pfam Helix-loop-helix DNA-binding domain 69 121 IPR011598 GO:0046983
Pte9g00273 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 120 IPR011598 GO:0046983
Pte9g00273 249 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 218 - -
Pte9g00273 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 135 IPR036638 GO:0046983
Pte9g00273 249 MobiDBLite consensus disorder prediction 48 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00273 Pte-Chr9 3024009 3026183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00273 70 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.976 5.04e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g00273 HLH 3.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00273 - - qsa:O6P43_005514 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00273 9 3024009 3026183 Pte9g00273 9 3024009 3026183 RCT