Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00255 ATGGCTGCCTCCCTTGGTATGTCTGAAATGCTTGGAACCCCTCTTAACTTCGGGGGTGCCAGTAGGTCAGCTCCATCATCCTCTACCTCTGCTACCTTCAAGACAGTAGCACTTTTCTCCAAGAAGAAGCCTGCAGCTCCAGCACCAAAATCAAAGCCAGCCAGTGTATCTCCAATCGATGATGAACTCGCCAAGTGGTATGGTCCCGAGAGAAGAATTTTCTTGCCAAGTGGTCTCTTGGACCGATCTGAAATCCCAGAGTACTTGACTGGAGAAGTACCTGGAGATTATGGCTATGACCCATTTGGGCTCGGCAAGAAGCCAGAGGACTTCAGCAAATACCAAGCATATGAATTGATCCACGCCCGTTGGGCCATGCTTGGTGCAGCAGGGTTCATCATCCCAGAAGCCTTCAACAAATTTGGTGCCAACTGTGGTCCTGAGGCTGTCTGGTTCAAGACAGGAGCATTGCTTCTTGATGGAAATACATTGAATTACTTTGGGAAGAACATCCCCATCAACCTTATAGTCGCTGTCATTGCTGAAGTGGTTCTTGTTGGTGGTGCAGAATACTACAGAATCATCAACGGGCTGGATTTGGAAGACAAGCTTCATCCTGGTGGTCCATTTGACCCACTGGGTCTTGCAAAGGATCCAGACCAGGCTGCATTGCTAAAGGTGAAAGAGATTAAGAATGGTAGACTTGCCATGTTTGCCATGCTTGGTTTCTTCCTCCAAGCTTATGTCACAGGAGAAGGTCCAGTTGAGAACCTAGCAAAACATCTCAGTGACCCTTTTGGTAACAACTTGCTCACTGTCATTGCTGGATCAGTTGAAAGAGCTCCTACTCTGTGA 855 0.4784 MAASLGMSEMLGTPLNFGGASRSAPSSSTSATFKTVALFSKKKPAAPAPKSKPASVSPIDDELAKWYGPERRIFLPSGLLDRSEIPEYLTGEVPGDYGYDPFGLGKKPEDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIVAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGSVERAPTL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00255 284 SUPERFAMILY Chlorophyll a-b binding protein 68 275 - -
Pte9g00255 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 24 275 IPR001344 GO:0009765|GO:0016020
Pte9g00255 284 FunFam Chlorophyll a-b binding protein, chloroplastic 73 284 - -
Pte9g00255 284 Gene3D Chlorophyll a/b binding protein domain 73 284 - -
Pte9g00255 284 Pfam Chlorophyll A-B binding protein 86 247 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00255 Pte-Chr9 2868539 2870382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00255 3 285 Chloroplast and Mitochondria Gene Families AT4G10340 84.507 2.08e-158 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00255 K08916 - cpap:110818730 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00255 9 2868539 2870382 Pte9g00255 9 2868539 2870382 RCT